RNA–Protein interactions for RNA: ENST00000393324.7

ME3-202, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,240 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-202ENST00000393324 CDH5P33151 784 aaPredicted RBP21.53■■□□□ 1.04
ME3-202ENST00000393324 TNNT3P45378 269 aaPredicted RBP21.53■■□□□ 1.04
ME3-202ENST00000393324 NOGQ13253 232 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 TAF2Q6P1X5 1199 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 GDAP1L1Q96MZ0 367 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 TWNKQ96RR1 684 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 HMGXB4Q9UGU5 601 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 SCN1AP35498 2009 aa21.53■■□□□ 1.04
ME3-202ENST00000393324 SEPT4O43236 478 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 MED7O43513 233 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 AOC2O75106 756 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 RECQL4O94761 1208 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 CALB1P05937 261 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 RARBP10826 455 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 SLC1A1P43005 524 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 RWDD2BP57060 319 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 SEL1L2Q5TEA6 688 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 SLC4A11Q8NBS3 891 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 AENQ8WTP8 325 aaKnown RBP21.52■■□□□ 1.04
ME3-202ENST00000393324 APOL6Q9BWW8 343 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 ESYT3A0FGR9 886 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 AKAP5P24588 427 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 NBPF20Q3BBV1 942 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 DENND1BQ6P3S1 775 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 ALKAL1Q6UXT8 129 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 TMEM176AQ96HP8 235 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 ELOVL4Q9GZR5 314 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 UPF3AQ9H1J1 476 aaKnown RBP21.52■■□□□ 1.04
ME3-202ENST00000393324 SLITRK6Q9H5Y7 841 aa21.52■■□□□ 1.04
ME3-202ENST00000393324 GOLGA6L10A0A0M3HER8 536 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 TLR3O15455 904 aaKnown RBP21.51■■□□□ 1.03
ME3-202ENST00000393324 PROSCO94903 275 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 CAP1Q01518 475 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 PTPN11Q06124 597 aaPredicted RBP21.51■■□□□ 1.03
ME3-202ENST00000393324 CACNB2Q08289 660 aaPredicted RBP21.51■■□□□ 1.03
ME3-202ENST00000393324 MYO1EQ12965 1108 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 ZBTB6Q15916 424 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 GLRA4Q5JXX5 417 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 CELF4Q9BZC1 486 aaKnown RBP21.51■■□□□ 1.03
ME3-202ENST00000393324 AMACRQ9UHK6 382 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 GTF2IRD1Q9UHL9 959 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 GJB6O95452 261 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 ERICH1Q86X53 443 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 FEZF2Q8TBJ5 459 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 LHX5Q9H2C1 402 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 CALCOCO1Q9P1Z2 691 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 CNTN3Q9P232 1028 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 TUBGCP4Q9UGJ1 667 aa21.51■■□□□ 1.03
ME3-202ENST00000393324 CARSP49589 748 aaKnown RBP21.5■■□□□ 1.03
ME3-202ENST00000393324 BEST2Q8NFU1 509 aa21.5■■□□□ 1.03
ME3-202ENST00000393324 CCDC26Q8TAB7 109 aa21.5■■□□□ 1.03
ME3-202ENST00000393324 IFT81Q8WYA0 676 aa21.5■■□□□ 1.03
ME3-202ENST00000393324 C18orf25Q96B23 403 aaPredicted RBP21.5■■□□□ 1.03
ME3-202ENST00000393324 ERVK-5Q9HDB9 667 aa21.5■■□□□ 1.03
ME3-202ENST00000393324 RNF19AQ9NV58 838 aa21.5■■□□□ 1.03
ME3-202ENST00000393324 BARX2Q9UMQ3 279 aaPredicted RBP21.5■■□□□ 1.03
ME3-202ENST00000393324 EPHB4P54760 987 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 SMC1AQ14683 1233 aaKnown RBP21.49■■□□□ 1.03
ME3-202ENST00000393324 UBXN11Q5T124 520 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 MAATS1Q7Z4T9 603 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 CASP8AP2Q9UKL3 1982 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 TULP2O00295 520 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 PPEF2O14830 753 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 HSPA6P17066 643 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 RPL7AP62424 266 aaKnown RBP21.49■■□□□ 1.03
ME3-202ENST00000393324 SP3Q02447 781 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 INCA1Q0VD86 236 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 PPP2R5EQ16537 467 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 DAB2IPQ5VWQ8 1189 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 GDF6Q6KF10 455 aaPredicted RBP21.49■■□□□ 1.03
ME3-202ENST00000393324 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.49■■□□□ 1.03
ME3-202ENST00000393324 CASKIN2Q8WXE0 1202 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 KLK14Q9P0G3 267 aa21.49■■□□□ 1.03
ME3-202ENST00000393324 PDCD11Q14690 1871 aaKnown RBP21.49■■□□□ 1.03
ME3-202ENST00000393324 NDST1P52848 882 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 MRPS6P82932 125 aaKnown RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 FAM47CQ5HY64 1035 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 DNAJC24Q6P3W2 148 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 TTC39CQ8N584 583 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 HEXIM2Q96MH2 286 aaKnown RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 PLVAPQ9BX97 442 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 RNF39Q9H2S5 420 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 FAM124BQ9H5Z6 455 aaPredicted RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 XPNPEP3Q9NQH7 507 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 PARP2Q9UGN5 583 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 NFU1Q9UMS0 254 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.48■■□□□ 1.03
ME3-202ENST00000393324 TCRBV5S1A1TA0A578 114 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 M0QZ92 97 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 ADAMTS4O75173 837 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 MYCNP04198 464 aaPredicted RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 NKX3-2P78367 333 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 TRADDQ15628 312 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 CYP4A22Q5TCH4 519 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 EMBQ6PCB8 327 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 SND1Q7KZF4 910 aaKnown RBP eCLIP21.48■■□□□ 1.03
ME3-202ENST00000393324 FAM228AQ86W67 206 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 SLC13A5Q86YT5 568 aaPredicted RBP21.48■■□□□ 1.03
ME3-202ENST00000393324 UBXN6Q9BZV1 441 aa21.48■■□□□ 1.03
ME3-202ENST00000393324 RNF186Q9NXI6 227 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms