RNA–Protein interactions for RNA: ENST00000393287.9

ATXN3-203, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-203ENST00000393287 SAGE1Q9NXZ1 904 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 IGF2BP3O00425 579 aaKnown RBP eCLIP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SELPP16109 830 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 GRIK3Q13003 919 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SEPT6Q14141 434 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 RAPH1Q70E73 1250 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 LRRC43Q8N309 656 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 SMARCD1Q96GM5 515 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 DPH5Q9H2P9 285 aa8.53□□□□□ -1.04
ATXN3-203ENST00000393287 DHX35Q9H5Z1 703 aaKnown RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 BARX2Q9UMQ3 279 aaPredicted RBP8.53□□□□□ -1.04
ATXN3-203ENST00000393287 EVI5O60447 810 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 FTCDO95954 541 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 CHEK2O96017 543 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 RENBPP51606 427 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 BEX3Q00994 111 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GFPT1Q06210 699 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 IQCB1Q15051 598 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 VPS9D1Q9Y2B5 631 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 RIPK3Q9Y572 518 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 RASSF10A6NK89 507 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ATP1A3P13637 1013 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 NFIL3Q16649 462 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PABPC1LQ4VXU2 614 aaKnown RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 SNF8Q96H20 258 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ZNF212Q9UDV6 495 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 KRT37O76014 449 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GZMAP12544 262 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PDGFRAP16234 1089 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 YWHAHQ04917 246 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GPATCH11Q8N954 259 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PXYLP1Q8TE99 480 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ZNF296Q8WUU4 475 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ASIC4Q96FT7 647 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ZNF668Q96K58 619 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 OSMRQ99650 979 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 F5H5T6 163 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 KRT38O76015 456 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PFKMP08237 780 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 CASP1P29466 404 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PSEN1P49768 467 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PHEXP78562 749 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GCNT1Q02742 428 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GUCY2DQ02846 1103 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 EMBQ6PCB8 327 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GDAP1Q8TB36 358 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 TMEM176AQ96HP8 235 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 TUBB6Q9BUF5 446 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 TTC26A0AVF1 554 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 NEMP1O14524 444 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 SLC9A3R1O14745 358 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 FGGP02679 453 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 CDR2Q01850 454 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 RRP1BQ14684 758 aaKnown RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 FBXO46Q6PJ61 603 aaPredicted RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 ANKS3Q6ZW76 656 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 LINC00523Q86TU6 105 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 FIBCD1Q8N539 461 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 NIFKQ9BYG3 293 aaKnown RBP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.52□□□□□ -1.05
ATXN3-203ENST00000393287 BFARQ9NZS9 450 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 GTF3C4Q9UKN8 822 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 PTPN22Q9Y2R2 807 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 CDY2AQ9Y6F7 541 aa8.52□□□□□ -1.05
ATXN3-203ENST00000393287 A0A0A6YYK5 440 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 FAM237AA0A1B0GTK4 181 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 SPAG6O75602 509 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 CYP3A5P20815 502 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 NCKAP1LP55160 1127 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 CDH6P55285 790 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 COPS2P61201 443 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 GTF2BQ00403 316 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 C10orf120Q5SQS8 335 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 C6orf118Q5T5N4 469 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 RBM43Q6ZSC3 357 aaKnown RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 FEZF2Q8TBJ5 459 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 PYROXD1Q8WU10 500 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 SKA2Q8WVK7 121 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 FBXO32Q969P5 355 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 C18orf25Q96B23 403 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 VCPIP1Q96JH7 1222 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 ZNF510Q9Y2H8 683 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 C2CD2Q9Y426 696 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 SF3B1O75533 1304 aaKnown RBP eCLIP8.51□□□□□ -1.054e-12■■■■■ 275.7
ATXN3-203ENST00000393287 RNASEH1O60930 286 aaKnown RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 AP1G2O75843 785 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 TMED2Q15363 201 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 GPAT2Q6NUI2 795 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 CPB2Q96IY4 423 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 PDE11AQ9HCR9 933 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 GRM5P41594 1212 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 TM4SF4P48230 202 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 RPS6KA2Q15349 733 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 CENPPQ6IPU0 288 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 DDX53Q86TM3 631 aaKnown RBP8.51□□□□□ -1.05
ATXN3-203ENST00000393287 CEP120Q8N960 986 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 FAM71BQ8TC56 605 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 SH2D3AQ9BRG2 576 aa8.51□□□□□ -1.05
ATXN3-203ENST00000393287 MRPL17Q9NRX2 175 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms