RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 ELMOD1Q8N336 334 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 PDCL2Q8N4E4 241 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 OR10T2Q8NGX3 314 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 NXPE3Q969Y0 559 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 HPDLQ96IR7 371 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 PGLYRP2Q96PD5 576 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 GSDMAQ96QA5 445 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 ZCWPW1Q9H0M4 648 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 GZF1Q9H116 711 aaPredicted RBP12.73□□□□□ -0.37
RFC4-202ENST00000392481 KCNK12Q9HB15 430 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 RMND1Q9NWS8 449 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 HCFC1R1Q9NWW0 138 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 CHMP5Q9NZZ3 219 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 HSFX1Q9UBD0 423 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 L1RE1Q9UN81 338 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 TRAF3IP3Q9Y228 551 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 MUC6Q6W4X9 2439 aa12.73□□□□□ -0.37
RFC4-202ENST00000392481 MTMR11A4FU01 709 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 SMC2O95347 1197 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 RHOP08100 348 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 AP3M2P53677 418 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 CLDN10P78369 228 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 SIGLEC14Q08ET2 396 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 TWF1Q12792 350 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 SMARCB1Q12824 385 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 DUSP4Q13115 394 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 PLD1Q13393 1074 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 NFIL3Q16649 462 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
RFC4-202ENST00000392481 TOP6BLQ8N6T0 577 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 ATAD1Q8NBU5 361 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 SPATA20Q8TB22 786 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 PARD3BQ8TEW8 1205 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 TMEM209Q96SK2 561 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 CRISPLD1Q9H336 500 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 CDH7Q9ULB5 785 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 MAPK8IP1Q9UQF2 711 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 YIPF1Q9Y548 306 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 SNX9Q9Y5X1 595 aa12.72□□□□□ -0.37
RFC4-202ENST00000392481 TMEM221A6NGB7 291 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 M0R296 226 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 ALDH1A3P47895 512 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 LHX1P48742 406 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 CASP4P49662 377 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 TSPY1Q01534 308 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 TDGQ13569 410 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 SOWAHAQ2M3V2 549 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 SLC39A12Q504Y0 691 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 IQCEQ6IPM2 695 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 LIMS2Q7Z4I7 341 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 DCP1BQ8IZD4 617 aaKnown RBP12.71□□□□□ -0.37
RFC4-202ENST00000392481 LEMD2Q8NC56 503 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 ITFG1Q8TB96 612 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 PLEKHO2Q8TD55 490 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 C2orf15Q8WU43 125 aaKnown RBP12.71□□□□□ -0.37
RFC4-202ENST00000392481 ZNF516Q92618 1163 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 FGF13Q92913 245 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 ZNF512Q96ME7 567 aaPredicted RBP12.71□□□□□ -0.37
RFC4-202ENST00000392481 ACBD6Q9BR61 282 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 GTPBP4Q9BZE4 634 aaKnown RBP12.71□□□□□ -0.37
RFC4-202ENST00000392481 CEP72Q9P209 647 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 FRMD4BQ9Y2L6 1034 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 MRPS23Q9Y3D9 190 aaKnown RBP12.71□□□□□ -0.37
RFC4-202ENST00000392481 PCDHA5Q9Y5H7 936 aa12.71□□□□□ -0.37
RFC4-202ENST00000392481 ANHXE9PGG2 379 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 ZNF197O14709 1029 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 GABRDO14764 452 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 MAPK13O15264 365 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 KINO60870 393 aaKnown RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 GADD45BO75293 160 aaPredicted RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 MICAL2O94851 1124 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 CST3P01034 146 aaPredicted RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 NR2F2P24468 414 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 RPL13P26373 211 aaKnown RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 TUFMP49411 452 aaKnown RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 EPHB3P54753 998 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 MYL7Q01449 175 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 TRPC3Q13507 836 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 HTR4Q13639 388 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 ZCWPW2Q504Y3 356 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 CEP135Q66GS9 1140 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 BMP8AQ7Z5Y6 402 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 LRRTM3Q86VH5 581 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 NPAS3Q8IXF0 933 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 ADGRF2Q8IZF7 708 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 SPPL2BQ8TCT7 592 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 TMC2Q8TDI7 906 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 SMARCE1Q969G3 411 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 DDX43Q9NXZ2 648 aaKnown RBP12.71□□□□□ -0.38
RFC4-202ENST00000392481 GDE1Q9NZC3 331 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 SLC27A5Q9Y2P5 690 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 ASB3Q9Y575 518 aa12.71□□□□□ -0.38
RFC4-202ENST00000392481 ZNF318Q5VUA4 2279 aa12.7□□□□□ -0.38
RFC4-202ENST00000392481 LRRIQ3A6PVS8 624 aaPredicted RBP12.7□□□□□ -0.38
RFC4-202ENST00000392481 IKBKBO14920 756 aa12.7□□□□□ -0.38
RFC4-202ENST00000392481 PHACTR2O75167 634 aa12.7□□□□□ -0.38
RFC4-202ENST00000392481 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms