RNA–Protein interactions for RNA: ENST00000389413.7

PTPRN2-201, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 1 (best) BASIC

Gene PTPRN2, Length 4,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-201ENST00000389413 NME3Q13232 169 aa16.92■□□□□ 0.3
PTPRN2-201ENST00000389413 SPDYCQ5MJ68 293 aa16.92■□□□□ 0.3
PTPRN2-201ENST00000389413 TRIM67Q6ZTA4 783 aa16.92■□□□□ 0.3
PTPRN2-201ENST00000389413 PGM2Q96G03 612 aa16.92■□□□□ 0.3
PTPRN2-201ENST00000389413 PCDHA3Q9Y5H8 950 aa16.92■□□□□ 0.3
PTPRN2-201ENST00000389413 O00370 1275 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 LCP1P13796 627 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 STIP1P31948 543 aaKnown RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 OCRLQ01968 901 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 CCNYL1Q8N7R7 359 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 SYTL5Q8TDW5 730 aaPredicted RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 ZNF560Q96MR9 790 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 HOXA10P31260 410 aaPredicted RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 MCL1Q07820 350 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 HIC1Q14526 733 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 TFDP3Q5H9I0 405 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 SLC26A7Q8TE54 656 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 FRMD8Q9BZ67 464 aaPredicted RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 ZBTB39O15060 712 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 GPD1P21695 349 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 NAMPTP43490 491 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 RYBPQ8N488 228 aaPredicted RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 CHST13Q8NET6 341 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 SCG3Q8WXD2 468 aaKnown RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 TNIP3Q96KP6 325 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 NT5C1AQ9BXI3 368 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 FRMD8P1Q9BZ68 369 aaPredicted RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 METTL5Q9NRN9 209 aaKnown RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 RARAP10276 462 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 SMAD1Q15797 465 aaKnown RBP16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 DNAL1Q4LDG9 190 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 PDZD8Q8NEN9 1154 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 ATP6V1E2Q96A05 226 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 PDCD2LQ9BRP1 358 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 FSD1LQ9BXM9 530 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 DONSONQ9NYP3 566 aa16.91■□□□□ 0.3
PTPRN2-201ENST00000389413 KIF1CO43896 1103 aaKnown RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 GRAP2O75791 330 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 ZNF189O75820 626 aaPredicted RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 GHRP10912 638 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 HSPA8P11142 646 aaKnown RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 MCOLN2Q8IZK6 566 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 LRRC71Q8N4P6 559 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 DTX3LQ8TDB6 740 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 TATDN2Q93075 761 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 PGBD4Q96DM1 585 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 DEFB129Q9H1M3 183 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 LTN1O94822 1766 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 MEIS2O14770 477 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 S100BP04271 92 aaPredicted RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 MORF4L2Q15014 288 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 ZFPM1Q8IX07 1006 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 KCTD10Q9H3F6 313 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 OGTO15294 1046 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 TRAPPC3O43617 180 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 PMLP29590 882 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 SEZ6Q53EL9 994 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 TTC39BQ5VTQ0 682 aaPredicted RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 ZNF518BQ9C0D4 1074 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 DRC3Q9H069 523 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 SLC24A3Q9HC58 644 aa16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 MARCOQ9UEW3 520 aaPredicted RBP16.9■□□□□ 0.3
PTPRN2-201ENST00000389413 CGRRF1Q99675 332 aa16.89■□□□□ 0.3
PTPRN2-201ENST00000389413 PCMTD2Q9NV79 361 aa16.89■□□□□ 0.3
PTPRN2-201ENST00000389413 PRMT7Q9NVM4 692 aaPredicted RBP16.89■□□□□ 0.3
PTPRN2-201ENST00000389413 GTSE1Q9NYZ3 720 aa16.89■□□□□ 0.3
PTPRN2-201ENST00000389413 CLGNO14967 610 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 SERPINB4P48594 390 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 PAPOLAP51003 745 aaKnown RBP16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 INPP4AQ96PE3 977 aaPredicted RBP16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 ASTN1O14525 1302 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 MAGEB2O15479 319 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 MTHFD1LQ6UB35 978 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 PACS2Q86VP3 889 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 CCDC124Q96CT7 223 aaKnown RBP16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 IFI35P80217 286 aaPredicted RBP16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 GCNT1Q02742 428 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 BOLA3Q53S33 107 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 NIPA1Q7RTP0 329 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 NSL1Q96IY1 281 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 DCLK3Q9C098 648 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 PXMP2Q9NR77 195 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 BAG5Q9UL15 447 aa16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.89■□□□□ 0.29
PTPRN2-201ENST00000389413 UBOX5O94941 541 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 SUPT20HL2P0C7V6 817 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 GNAT1P11488 350 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 KIF22Q14807 665 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 ANO5Q75V66 913 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 ABI1Q8IZP0 508 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 ABRAQ8N0Z2 381 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 MRPL40Q9NQ50 206 aaKnown RBP16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 NAALADL1Q9UQQ1 740 aa16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 SPDYE16A6NNV3 312 aaPredicted RBP16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 TARSP26639 723 aaKnown RBP16.88■□□□□ 0.29
PTPRN2-201ENST00000389413 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms