RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 ATF2P15336 505 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 IVDP26440 423 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 GTF2H1P32780 548 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ROR2Q01974 943 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 PSMD6Q15008 389 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 CYP4F22Q6NT55 531 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 LONP2Q86WA8 852 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 MFN1Q8IWA4 741 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 TAB3Q8N5C8 712 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ABTB1Q969K4 478 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 MRRFQ96E11 262 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF317Q96PQ6 595 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 TCHPQ9BT92 498 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 R3HDMLQ9H3Y0 253 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 MYH9P35579 1960 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 AHCYL1O43865 530 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 GH1P01241 217 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 CETPP11597 493 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 OSTNP61366 133 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 MAMLD1Q13495 774 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 MTM1Q13496 603 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ANKRD20A8PQ5CZ79 823 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 XKR3Q5GH77 459 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 TLDC1Q6P9B6 456 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 CYP4X1Q8N118 509 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 CCDC63Q8NA47 563 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ARHGEF2Q92974 986 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 GORASP1Q9BQQ3 440 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ACAD9Q9H845 621 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 NOP53Q9NZM5 478 aaKnown RBP12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 ANAPC5Q9UJX4 755 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 C15orf41Q9Y2V0 281 aa12.38□□□□□ -0.43
RAPGEF3-201ENST00000389212 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZSCAN9O15535 394 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 RNF8O76064 485 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 AGTP01019 485 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 IMPDH2P12268 514 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF280AP59817 542 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 NOMO3P69849 1222 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 FAM133BQ5BKY9 247 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 DALRD3Q5D0E6 543 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 PPP1R15BQ5SWA1 713 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 TXNRD3NBQ6F5E7 133 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 GSTA5Q7RTV2 222 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 TMEM110Q86TL2 294 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 RDM1Q8NG50 284 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 SNF8Q96H20 258 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 SENP7Q9BQF6 1050 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 TEX13BQ9BXU2 312 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 C17orf75Q9HAS0 396 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 DNAAF2Q9NVR5 837 aaKnown RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 C5orf60A6NFR6 353 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 SPATA31C2B4DYI2 1134 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 PROSCO94903 275 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 ATP6V1G2O95670 118 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 CYP1A1P04798 512 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 CENPCQ03188 943 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 TRIM50Q86XT4 487 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 ANKRD35Q8N283 1001 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 OSBPL8Q9BZF1 889 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 C10orf88Q9H8K7 445 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 C2CD2Q9Y426 696 aa12.37□□□□□ -0.43
RAPGEF3-201ENST00000389212 TMEM120BA0PK00 339 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SRGAP2CP0DJJ0 459 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 FDX1P10109 184 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ORC1Q13415 861 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 CNGA2Q16280 664 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SPDYCQ5MJ68 293 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ABRAQ8N0Z2 381 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 FHDC1Q9C0D6 1143 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 MTMR12Q9C0I1 747 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ACTR5Q9H9F9 607 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZFATQ9P243 1243 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 GSTTP1A0A1W2PQM5 241 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 GAS8O95995 478 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 GJB1P08034 283 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 WEE2P0C1S8 567 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 NCOA4Q13772 614 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 MPP2Q14168 576 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 CYP4A22Q5TCH4 519 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 RHBDF2Q6PJF5 856 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ZNF365Q70YC5 407 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 ENOSF1Q7L5Y1 443 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 YTHDF3Q7Z739 585 aaKnown RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SDCCAG8Q86SQ7 713 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 CCDC197Q8NCU1 140 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SLC7A3Q8WY07 619 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 NINJ2Q9NZG7 142 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 F8VP50 259 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 PIAS1O75925 651 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 SCTRP47872 440 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 LIN9Q5TKA1 542 aa12.36□□□□□ -0.43
RAPGEF3-201ENST00000389212 IZUMO3Q5VZ72 239 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms