RNA–Protein interactions for RNA: ENST00000383801.6

SEC13-203, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2 BASIC

Gene SEC13, Length 1,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-203ENST00000383801 ANAPC7Q9UJX3 599 aa14.42□□□□□ -0.1
SEC13-203ENST00000383801 NOC2LQ9Y3T9 749 aaKnown RBP14.42□□□□□ -0.1
SEC13-203ENST00000383801 TRIP12Q14669 1992 aaPredicted RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 KRIT1O00522 736 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 MAP2K7O14733 419 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 PSTPIP1O43586 416 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 ECM2O94769 699 aaPredicted RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 FGFR4P22455 802 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 PAX3P23760 479 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 ZNF200P98182 395 aaPredicted RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 GPS2Q13227 327 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 PIGHQ14442 188 aaPredicted RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 ZNF268Q14587 947 aaPredicted RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 UBXN11Q5T124 520 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 CXCL17Q6UXB2 119 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 RNF180Q86T96 592 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 SLC4A11Q8NBS3 891 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 WHAMMQ8TF30 809 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 FNIP1Q8TF40 1166 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 TMEM40Q8WWA1 233 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 PKNOX2Q96KN3 472 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 ZNF560Q96MR9 790 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 TSEN34Q9BSV6 310 aaKnown RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 NT5C1AQ9BXI3 368 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 ACBD3Q9H3P7 528 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 GOLPH3Q9H4A6 298 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 ZNF446Q9NWS9 450 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 GDAP2Q9NXN4 497 aa14.41□□□□□ -0.1
SEC13-203ENST00000383801 PDCD11Q14690 1871 aaKnown RBP14.41□□□□□ -0.1
SEC13-203ENST00000383801 MYADML2A6NDP7 307 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 MOXD2PA6NHM9 499 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 PIRO00625 290 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 RPS6KA5O75582 802 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 RECQL4O94761 1208 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 FGGP02679 453 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 ASGR1P07306 291 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 GABRB2P47870 512 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 APLP1P51693 650 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 IRX5P78411 483 aaPredicted RBP14.4□□□□□ -0.1
SEC13-203ENST00000383801 NNTQ13423 1086 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 ACAP1Q15027 740 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 SGO2Q562F6 1265 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 LRRC38Q5VT99 294 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 EMBQ6PCB8 327 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 C3orf20Q8ND61 904 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 C11orf70Q9BRQ4 267 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 FUT8Q9BYC5 575 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 GDF3Q9NR23 364 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 SLC38A7Q9NVC3 462 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 RNF186Q9NXI6 227 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 MTUS1Q9ULD2 1270 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 POLIQ9UNA4 740 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 CDY2AQ9Y6F7 541 aa14.4□□□□□ -0.1
SEC13-203ENST00000383801 SMIM28A0A1B0GU29 152 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 TCRBV5S1A1TA0A578 114 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 TMEM191CA6NGB0 347 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SART1O43290 800 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 PGK1P00558 417 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SETSIPP0DME0 302 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SKIP12755 728 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 PRKAR2AP13861 404 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 BRD2P25440 801 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 LRPAP1P30533 357 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 CETN2P41208 172 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 DNA2P51530 1060 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 PTK7Q13308 1070 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 CUL1Q13616 776 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 KCNA10Q16322 511 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 ZNF394Q53GI3 561 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SCARA3Q6AZY7 606 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 GDF6Q6KF10 455 aaPredicted RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 LCLAT1Q6UWP7 414 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 RHOT1Q8IXI2 618 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 WDTC1Q8N5D0 677 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 NIPA2Q8N8Q9 360 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 TFAP2BQ92481 460 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 KRT12Q99456 494 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SENP6Q9GZR1 1112 aaPredicted RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 HOMER3Q9NSC5 361 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 DDX20Q9UHI6 824 aaKnown RBP14.39□□□□□ -0.11
SEC13-203ENST00000383801 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.39□□□□□ -0.11
SEC13-203ENST00000383801 IPPQ9Y573 584 aa14.39□□□□□ -0.11
SEC13-203ENST00000383801 SIGLEC16A6NMB1 481 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 BHMG1C9JSJ3 638 aaPredicted RBP14.38□□□□□ -0.11
SEC13-203ENST00000383801 AOC2O75106 756 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 ZNF623O75123 536 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CD19P15391 556 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CHRNA3P32297 505 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 RAB27AP51159 221 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 EPHB4P54760 987 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 CDH8P55286 799 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 MGAT3Q09327 533 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 SV2CQ496J9 727 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 FAM26DQ5JW98 314 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 FBXO47Q5MNV8 452 aa14.38□□□□□ -0.11
SEC13-203ENST00000383801 PPP1R15BQ5SWA1 713 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms