RNA–Protein interactions for RNA: ENST00000381800.3

LOH12CR2-201, Transcript of loss of heterozygosity, 12, chromosomal region 2, humanhuman

TSL 1 (best) BASIC

Gene LOH12CR2, Length 1,540 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LOH12CR2-201ENST00000381800 DOCK3Q8IZD9 2030 aa17.17■□□□□ 0.34
LOH12CR2-201ENST00000381800 TLR3O15455 904 aaKnown RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 ITGB3P05106 788 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FAM153BP0C7A2 387 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 DARSP14868 501 aaKnown RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 HOXA11P31270 313 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 COILP38432 576 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 RAD23BP54727 409 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 HLTFQ14527 1009 aaKnown RBP eCLIP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 STILQ15468 1287 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 WDR72Q3MJ13 1102 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FAM153CQ494X1 144 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 CFAP58Q5T655 872 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 NOTUMQ6P988 496 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 SAPCD2Q86UD0 394 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 PASD1Q8IV76 773 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 ZDHHC14Q8IZN3 488 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 WDTC1Q8N5D0 677 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FNIP1Q8TF40 1166 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 TFAP2BQ92481 460 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 AP5M1Q9H0R1 490 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 DPP3Q9NY33 737 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FLRT1Q9NZU1 646 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FAM153AQ9UHL3 310 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 ADAM21Q9UKJ8 722 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 POLIQ9UNA4 740 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FAN1Q9Y2M0 1017 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 RNF40O75150 1001 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 KRT19P08727 400 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 RARAP10276 462 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 VDRP11473 427 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 PTPN7P35236 360 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 PTPN11Q06124 597 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 PIGHQ14442 188 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 ZBTB6Q15916 424 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 DNAJC24Q6P3W2 148 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 SLC4A11Q8NBS3 891 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 HPDLQ96IR7 371 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 GDAP1L1Q96MZ0 367 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 HINFPQ9BQA5 517 aa17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 NXF1Q9UBU9 619 aaKnown RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 FEZ2Q9UHY8 353 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 BARX2Q9UMQ3 279 aaPredicted RBP17.16■□□□□ 0.34
LOH12CR2-201ENST00000381800 DAPK3O43293 454 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 HMGCRP04035 888 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 GNAT1P11488 350 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CYP2C9P11712 490 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CETN2P41208 172 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 COPS2P61201 443 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 NKX3-2P78367 333 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 SREBF2Q12772 1141 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CNGA2Q16280 664 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 AADACL2Q6P093 401 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 SCARA5Q6ZMJ2 495 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CATSPER4Q7RTX7 472 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CPNE8Q86YQ8 564 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 LRRC52Q8N7C0 313 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 TMEM176AQ96HP8 235 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 SNX27Q96L92 541 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 RUFY1Q96T51 708 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CELF4Q9BZC1 486 aaKnown RBP17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 TRIM7Q9C029 511 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 MIS12Q9H081 205 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 SDCBP2Q9H190 292 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 ZDHHC18Q9NUE0 388 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 VPS18Q9P253 973 aa17.15■□□□□ 0.34
LOH12CR2-201ENST00000381800 CSDE1O75534 798 aaKnown RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 GABRB2P47870 512 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 MYO1EQ12965 1108 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 KLF1Q13351 362 aaPredicted RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZNF268Q14587 947 aaPredicted RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 TRADDQ15628 312 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 KIZQ2M2Z5 673 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 CCDC137Q6PK04 289 aaKnown RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 ALKAL1Q6UXT8 129 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 RCOR2Q8IZ40 523 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 PIK3R5Q8WYR1 880 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 RBM41Q96IZ5 413 aaKnown RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 TXLNGYQ9BZA5 131 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 NMRK2Q9NPI5 230 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 CNTN3Q9P232 1028 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 AGAP1Q9UPQ3 857 aa17.14■□□□□ 0.33
LOH12CR2-201ENST00000381800 SIGLEC16A6NMB1 481 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 PPFIA2O75334 1257 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 CYP2C19P33261 490 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 YARSP54577 528 aaKnown RBP17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 ACAP1Q15027 740 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 XKR4Q5GH76 650 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 PRAMEF19Q5SWL8 479 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 DENND1BQ6P3S1 775 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 TTC27Q6P3X3 843 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 POLNQ7Z5Q5 900 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 GRK7Q8WTQ7 553 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 KIF12Q96FN5 646 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 ZIM3Q96PE6 472 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 ELOVL4Q9GZR5 314 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 SMYD3Q9H7B4 428 aa17.13■□□□□ 0.33
LOH12CR2-201ENST00000381800 DDX56Q9NY93 547 aaKnown RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms