RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 TRIM7Q9C029 511 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-203ENST00000381209 ELOVL4Q9GZR5 314 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 IP6K2Q9UHH9 426 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 STRIP2Q9ULQ0 834 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 BARX2Q9UMQ3 279 aaPredicted RBP18.33■□□□□ 0.53
RPAIN-203ENST00000381209 GABRQQ9UN88 632 aa18.33■□□□□ 0.53
RPAIN-203ENST00000381209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.33■□□□□ 0.53
RPAIN-203ENST00000381209 MYADML2A6NDP7 307 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 TLR3O15455 904 aaKnown RBP18.33■□□□□ 0.52
RPAIN-203ENST00000381209 SEPT4O43236 478 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 VDRP11473 427 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 GUCY2FP51841 1108 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 LLGL2Q6P1M3 1020 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 DENND1BQ6P3S1 775 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 PHLDB2Q86SQ0 1253 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 CPNE8Q86YQ8 564 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 SLC13A5Q86YT5 568 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-203ENST00000381209 REM2Q8IYK8 340 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-203ENST00000381209 CASKIN2Q8WXE0 1202 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 ARHGAP39Q9C0H5 1083 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 GPBP1L1Q9HC44 474 aaPredicted RBP18.33■□□□□ 0.52
RPAIN-203ENST00000381209 MTUS1Q9ULD2 1270 aa18.33■□□□□ 0.52
RPAIN-203ENST00000381209 PIN4Q9Y237 131 aaKnown RBP18.33■□□□□ 0.52
RPAIN-203ENST00000381209 EVPLQ92817 2033 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 FAM187AA6NFU0 413 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 TMEM191CA6NGB0 347 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 PSTPIP1O43586 416 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 RPLP2P05387 115 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 CHRNA3P32297 505 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 CARSP49589 748 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 GSCP56915 257 aaPredicted RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 NOGQ13253 232 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 DHX34Q14147 1143 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 CNGA2Q16280 664 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 UBXN11Q5T124 520 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 DNAJC24Q6P3W2 148 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 SND1Q7KZF4 910 aaKnown RBP eCLIP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 ZMAT2Q96NC0 199 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 RUNDC3BQ96NL0 473 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 HINFPQ9BQA5 517 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 AMACRQ9UHK6 382 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 GTF2IRD1Q9UHL9 959 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 HPCAL4Q9UM19 191 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
RPAIN-203ENST00000381209 NR2E1Q9Y466 385 aa18.32■□□□□ 0.52
RPAIN-203ENST00000381209 KIF3CO14782 793 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 PHF2O75151 1096 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 RECQL4O94761 1208 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 HMGCRP04035 888 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 RARBP10826 455 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 AARSP49588 968 aaKnown RBP eCLIP18.31■□□□□ 0.52
RPAIN-203ENST00000381209 CYP1B1Q16678 543 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 PPP1R15BQ5SWA1 713 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 AADACL2Q6P093 401 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 PAXIP1Q6ZW49 1069 aaPredicted RBP18.31■□□□□ 0.52
RPAIN-203ENST00000381209 RSPH3Q86UC2 560 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 RHOT1Q8IXI2 618 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 TMEM130Q8N3G9 435 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 C3orf20Q8ND61 904 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 MAIP1Q8WWC4 291 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 IFT81Q8WYA0 676 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 SEC14L1Q92503 715 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
RPAIN-203ENST00000381209 TWNKQ96RR1 684 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 NXF3Q9H4D5 531 aaKnown RBP18.31■□□□□ 0.52
RPAIN-203ENST00000381209 WDR35Q9P2L0 1181 aa18.31■□□□□ 0.52
RPAIN-203ENST00000381209 ZSCAN5CA6NGD5 496 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-203ENST00000381209 FSCN2O14926 492 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 XPOTO43592 962 aaKnown RBP18.3■□□□□ 0.52
RPAIN-203ENST00000381209 CD4P01730 458 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 KCNE1P15382 129 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 ATF7P17544 494 aaPredicted RBP18.3■□□□□ 0.52
RPAIN-203ENST00000381209 MRPS6P82932 125 aaKnown RBP18.3■□□□□ 0.52
RPAIN-203ENST00000381209 PRKCZQ05513 592 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 STILQ15468 1287 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 PRELID2Q8N945 189 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 RAB17Q9H0T7 212 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 ERVK-5Q9HDB9 667 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 NFU1Q9UMS0 254 aa18.3■□□□□ 0.52
RPAIN-203ENST00000381209 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
RPAIN-203ENST00000381209 ESYT3A0FGR9 886 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 M0QZ92 97 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 O00370 1275 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 NDST1P52848 882 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 DR1Q01658 176 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 NBPF20Q3BBV1 942 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 SGO2Q562F6 1265 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 LRRC38Q5VT99 294 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 RPAINQ86UA6 219 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 C12orf50Q8NA57 414 aaPredicted RBP18.29■□□□□ 0.52
RPAIN-203ENST00000381209 HEXIM2Q96MH2 286 aaKnown RBP18.29■□□□□ 0.52
RPAIN-203ENST00000381209 NT5C1AQ9BXI3 368 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 FAM114A2Q9NRY5 505 aa18.29■□□□□ 0.52
RPAIN-203ENST00000381209 HMGXB4Q9UGU5 601 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms