RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 PTPN11Q06124 597 aaPredicted RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 MAMLD1Q13495 774 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 C2CD6Q53TS8 623 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 TWF2Q6IBS0 349 aaKnown RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 RNF180Q86T96 592 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 ALG3Q92685 438 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 C18orf25Q96B23 403 aaPredicted RBP22.84■■□□□ 1.25
GMDS-202ENST00000380815 LRRC1Q9BTT6 524 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 RNF39Q9H2S5 420 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 CHST12Q9NRB3 414 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 PARP2Q9UGN5 583 aa22.84■■□□□ 1.25
GMDS-202ENST00000380815 TLR3O15455 904 aaKnown RBP22.83■■□□□ 1.24
GMDS-202ENST00000380815 XPOTO43592 962 aaKnown RBP22.83■■□□□ 1.24
GMDS-202ENST00000380815 SPOPO43791 374 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 ZRANB2O95218 330 aaKnown RBP eCLIP22.83■■□□□ 1.24
GMDS-202ENST00000380815 PEX5P50542 639 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 MGAT3Q09327 533 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 CLUL1Q15846 466 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 PTGISQ16647 500 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 GLRA4Q5JXX5 417 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 WDTC1Q8N5D0 677 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 C1orf131Q8NDD1 294 aaKnown RBP22.83■■□□□ 1.24
GMDS-202ENST00000380815 TWNKQ96RR1 684 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 ELOVL4Q9GZR5 314 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 PARVAQ9NVD7 372 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 ST3GAL5Q9UNP4 418 aa22.83■■□□□ 1.24
GMDS-202ENST00000380815 CCDC66A2RUB6 948 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 MYO1FO00160 1098 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 ATF7P17544 494 aaPredicted RBP22.82■■□□□ 1.24
GMDS-202ENST00000380815 CTNNA2P26232 953 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 CTNNA1P35221 906 aaKnown RBP22.82■■□□□ 1.24
GMDS-202ENST00000380815 SLC1A1P43005 524 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 C9orf57Q5W0N0 161 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 HMGXB4Q9UGU5 601 aa22.82■■□□□ 1.24
GMDS-202ENST00000380815 CYP3A5P20815 502 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 VEGFBP49765 207 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 C8orf74Q6P047 294 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 KRT35Q92764 455 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 RNPC3Q96LT9 517 aaKnown RBP22.81■■□□□ 1.24
GMDS-202ENST00000380815 NAP1L3Q99457 506 aaPredicted RBP22.81■■□□□ 1.24
GMDS-202ENST00000380815 KLK14Q9P0G3 267 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 KIAA1257Q9ULG3 409 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 PCDHA3Q9Y5H8 950 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 CCDC188H7C350 402 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 PIRO00625 290 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 PPEF2O14830 753 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 CTSHP09668 335 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 VDRP11473 427 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 LLGL2Q6P1M3 1020 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 PHLDB2Q86SQ0 1253 aa22.81■■□□□ 1.24
GMDS-202ENST00000380815 PDCD11Q14690 1871 aaKnown RBP22.81■■□□□ 1.24
GMDS-202ENST00000380815 CENPFP49454 3210 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 GPR182O15218 404 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 ATP8B1O43520 1251 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 FGGP02679 453 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 NDST1P52848 882 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 DENND1BQ6P3S1 775 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 ERICH1Q86X53 443 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 NT5C1AQ9BXI3 368 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 TRIM7Q9C029 511 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 SNX9Q9Y5X1 595 aa22.8■■□□□ 1.24
GMDS-202ENST00000380815 KRIT1O00522 736 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 THPOP40225 353 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 MARCKSL1P49006 195 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 ACLYP53396 1101 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 NFX1Q12986 1120 aaKnown RBP22.79■■□□□ 1.24
GMDS-202ENST00000380815 ORC1Q13415 861 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 ITGA7Q13683 1181 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 CNGA2Q16280 664 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 ARRDC4Q8NCT1 418 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 HDAC7Q8WUI4 952 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 HEXIM2Q96MH2 286 aaKnown RBP22.79■■□□□ 1.24
GMDS-202ENST00000380815 KRT12Q99456 494 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 STIM2Q9P246 746 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 STRIP2Q9ULQ0 834 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.79■■□□□ 1.24
GMDS-202ENST00000380815 SCN1AP35498 2009 aa22.79■■□□□ 1.24
GMDS-202ENST00000380815 TCRBV5S1A1TA0A578 114 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 PROSCO94903 275 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 SEC31AO94979 1220 aaKnown RBP22.78■■□□□ 1.24
GMDS-202ENST00000380815 PNPLA4P41247 253 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 PTK7Q13308 1070 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 ARHGEF6Q15052 776 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 LONRF2Q1L5Z9 754 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 SGO2Q562F6 1265 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 BEND6Q5SZJ8 279 aaPredicted RBP22.78■■□□□ 1.24
GMDS-202ENST00000380815 FEZF2Q8TBJ5 459 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 ZNF560Q96MR9 790 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 DMGDHQ9UI17 866 aaKnown RBP22.78■■□□□ 1.24
GMDS-202ENST00000380815 LCMT1Q9UIC8 334 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 MOXD2PA6NHM9 499 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 O00370 1275 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 RRP9O43818 475 aaKnown RBP22.78■■□□□ 1.24
GMDS-202ENST00000380815 FBXO47Q5MNV8 452 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 CPNE8Q86YQ8 564 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 HACE1Q8IYU2 909 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 AP1M1Q9BXS5 423 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 FAM105AQ9NUU6 356 aa22.78■■□□□ 1.24
GMDS-202ENST00000380815 RWDD2BP57060 319 aa22.77■■□□□ 1.24
GMDS-202ENST00000380815 TAP1Q03518 808 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms