RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 CLSTN3Q9BQT9 956 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 PHF7Q9BWX1 381 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 MAN1C1Q9NR34 630 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 MTRRQ9UBK8 725 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 AGAP1Q9UPQ3 857 aa9.97□□□□□ -0.81
HMGN1-202ENST00000380747 R3HCC1Q9Y3T6 440 aaKnown RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 TIMM13Q9Y5L4 95 aaPredicted RBP9.97□□□□□ -0.81
HMGN1-202ENST00000380747 DMXL1Q9Y485 3027 aa9.96□□□□□ -0.81
HMGN1-202ENST00000380747 KMT2EQ8IZD2 1858 aa9.96□□□□□ -0.81
HMGN1-202ENST00000380747 DNAH14Q0VDD8 3507 aa9.96□□□□□ -0.81
HMGN1-202ENST00000380747 CITO14578 2027 aa9.96□□□□□ -0.81
HMGN1-202ENST00000380747 ANO9A1A5B4 782 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 H7C4K7 107 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 PDXKO00764 312 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 SYN3O14994 580 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ADAM12O43184 909 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 TGM5O43548 720 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ITGB3P05106 788 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 WEE2P0C1S8 567 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 HOXB8P17481 243 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 TNNI1P19237 187 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 POLR2BP30876 1174 aaKnown RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 OR1D2P34982 312 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 AARSP49588 968 aaKnown RBP eCLIP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 TAF6P49848 677 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 LILRA4P59901 499 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CYP24A1Q07973 514 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 BFSP1Q12934 665 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 PSMD6Q15008 389 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CTXN3Q4LDR2 81 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 TMEM259Q4ZIN3 620 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF658Q5TYW1 1059 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CEP135Q66GS9 1140 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CES5AQ6NT32 575 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ELMSAN1Q6PJG2 1045 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 RSPO2Q6UXX9 243 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 GUF1Q8N442 669 aaKnown RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CSGALNACT2Q8N6G5 542 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 C1orf127Q8N9H9 656 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 SUSD6Q92537 303 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF560Q96MR9 790 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 GBP4Q96PP9 640 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 MTMR12Q9C0I1 747 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 INTS13Q9NVM9 706 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 DMAC2Q9NW81 257 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 DPP7Q9UHL4 492 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 MAN1B1Q9UKM7 699 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 TRAF3IP3Q9Y228 551 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 USP15Q9Y4E8 981 aaPredicted RBP9.96□□□□□ -0.82
HMGN1-202ENST00000380747 BACE2Q9Y5Z0 518 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 CDY1Q9Y6F8 540 aa9.96□□□□□ -0.82
HMGN1-202ENST00000380747 ARHGEF37A1IGU5 675 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 M0QZQ0 153 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 BIN1O00499 593 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 ODC1P11926 461 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 PAX3P23760 479 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 AVPR2P30518 371 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 PNPLA4P41247 253 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 CASP4P49662 377 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 RBP5P82980 135 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 YWHAHQ04917 246 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-202ENST00000380747 DUOXA2Q1HG44 320 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 SV2CQ496J9 727 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 ZNF280DQ6N043 979 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 TMC5Q6UXY8 1006 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 USP37Q86T82 979 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 WDR49Q8IV35 697 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 SLC9A9Q8IVB4 645 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 ELOA2Q8IYF1 753 aaPredicted RBP9.95□□□□□ -0.82
HMGN1-202ENST00000380747 KREMEN2Q8NCW0 462 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 OR5B17Q8NGF7 314 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 SPATA20Q8TB22 786 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 WNT2BQ93097 391 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 SENP8Q96LD8 212 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 CGRRF1Q99675 332 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 GTPBP4Q9BZE4 634 aaKnown RBP9.95□□□□□ -0.82
HMGN1-202ENST00000380747 S1PR5Q9H228 398 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 SFXN1Q9H9B4 322 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 CDH22Q9UJ99 828 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 FBXL5Q9UKA1 691 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 ITGA11Q9UKX5 1188 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 FRMD4BQ9Y2L6 1034 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 PTPRJQ12913 1337 aa9.95□□□□□ -0.82
HMGN1-202ENST00000380747 TRIP11Q15643 1979 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PDCD11Q14690 1871 aaKnown RBP9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CCDC195A0A1B0GUA6 201 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 KPNA7A9QM74 516 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CYB561D2O14569 222 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PHACTR2O75167 634 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CLSTN1O94985 981 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 CPB1P15086 417 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 TYMPP19971 482 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 NR2F2P24468 414 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 RPL13P26373 211 aaKnown RBP9.94□□□□□ -0.82
HMGN1-202ENST00000380747 PRCPP42785 496 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 VCPP55072 806 aaKnown RBP9.94□□□□□ -0.82
HMGN1-202ENST00000380747 ITIH3Q06033 890 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 ADAM9Q13443 819 aa9.94□□□□□ -0.82
HMGN1-202ENST00000380747 RAB33AQ14088 237 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms