RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 CYP4A22Q5TCH4 519 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 DTX3LQ8TDB6 740 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 TBC1D10AQ9BXI6 508 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 OSBPL8Q9BZF1 889 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 PHACTR1Q9C0D0 580 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 DNPEPQ9ULA0 475 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 PHF24Q9UPV7 400 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 RIPK3Q9Y572 518 aa13.15□□□□□ -0.3
PRPF40B-202ENST00000380281 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 TP73O15350 636 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 CBX6O95503 412 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 INHBCP55103 352 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 MTA1Q13330 715 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 IRGCQ6NXR0 463 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 TRIM42Q8IWZ5 723 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 CD101Q93033 1021 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 ZNF333Q96JL9 665 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 PPP1R16BQ96T49 567 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 TMEM121Q9BTD3 319 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 A0A1W2PPM1 405 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SGK1O00141 431 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 ARSEP51690 589 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 NLRP11P59045 1033 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SEPT7Q16181 437 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 KHDC1Q4VXA5 237 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SLC39A4Q6P5W5 647 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 DCUN1D2Q6PH85 259 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 BTNL9Q6UXG8 535 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 NLRX1Q86UT6 975 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 MCOLN2Q8IZK6 566 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 TMEM161BQ8NDZ6 487 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 LRRC8CQ8TDW0 803 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SCG3Q8WXD2 468 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 ZNF516Q92618 1163 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 DCLK3Q9C098 648 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 F8VP50 259 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 HSPA6P17066 643 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 CAP2P40123 477 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 USP46P62068 366 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 EFTUD2Q15029 972 aaKnown RBP eCLIP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 PABPC1LQ4VXU2 614 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 RFWD3Q6PCD5 774 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SYTL5Q8TDW5 730 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 PSPC1Q8WXF1 523 aaKnown RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 TRAPPC9Q96Q05 1148 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 SERPINA10Q9UK55 444 aa13.14□□□□□ -0.31
PRPF40B-202ENST00000380281 HNRNPRO43390 633 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 KRT1P04264 644 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 GZMAP12544 262 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 MAGEA4P43358 317 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 CNPY1Q3B7I2 92 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 SNX30Q5VWJ9 437 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 CCDC33Q8N5R6 958 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 TARS2Q9BW92 718 aaKnown RBP13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 PRKAG3Q9UGI9 489 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 PCSK1NQ9UHG2 260 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 ZNF862O60290 1169 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 PFDN1O60925 122 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 CYP1A1P04798 512 aaPredicted RBP13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 WEE2P0C1S8 567 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 BPIFB4P59827 614 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 TMEM132AQ24JP5 1023 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 CLEC16AQ2KHT3 1053 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 PCNX4Q63HM2 1172 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 NRG4Q8WWG1 115 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 TXLNGQ9NUQ3 528 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 ATXN10Q9UBB4 475 aa13.13□□□□□ -0.31
PRPF40B-202ENST00000380281 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 SPDYE2BA6NHP3 402 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 F5H423 210 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 RGL2O15211 777 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 CYP1A2P05177 515 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 SPDYE6P0CI01 402 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 CD19P15391 556 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 GNA15P30679 374 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 SSTR1P30872 391 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 HIRAP54198 1017 aaPredicted RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 DRG2P55039 364 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 WDR4P57081 412 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 RCN1Q15293 331 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 MFSD7Q6UXD7 560 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 DTNBP1Q96EV8 351 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 RIT2Q99578 217 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 CCDC77Q9BR77 488 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 RANBP17Q9H2T7 1088 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 TMEM8AQ9HCN3 771 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 CNOT7Q9UIV1 285 aaKnown RBP13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 LRCH1Q9Y2L9 728 aa13.12□□□□□ -0.31
PRPF40B-202ENST00000380281 NEU2Q9Y3R4 380 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms