RNA–Protein interactions for RNA: ENST00000379826.4

SMAD9-202, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMAD9, Length 5,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-202ENST00000379826 FCGRTP55899 365 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PPP6R3Q5H9R7 873 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 APOBEC3HQ6NTF7 200 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 HACE1Q8IYU2 909 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 FAM71DQ8N9W8 422 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM35BQ8NCS4 154 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 C1orf131Q8NDD1 294 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 CKAP2Q8WWK9 683 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 INO80BQ9C086 356 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 METTL5Q9NRN9 209 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ADARB2Q9NS39 739 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 LRRC4BQ9NT99 713 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 AKAP11Q9UKA4 1901 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PRPSAP2O60256 369 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 TM4SF1P30408 202 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 EIF3EP60228 445 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 XRCC4Q13426 336 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ZNF699Q32M78 642 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ENOSF1Q7L5Y1 443 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 NME8Q8N427 588 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 TEX9Q8N6V9 391 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GMCL1P1Q8NEA9 526 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 FAM111AQ96PZ2 611 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PARK7Q99497 189 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 VAV3Q9UKW4 847 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 USP54Q70EL1 1684 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 H3BRJ5 948 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 KRT76Q01546 638 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 MCOLN2Q8IZK6 566 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 RMDN2Q96LZ7 410 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GGA3Q9NZ52 723 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PCDHB2Q9Y5E7 798 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 CCDC22O60826 627 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ZBED1O96006 694 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 PTGIRP43119 386 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GMPSP49915 693 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ROR1Q01973 937 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 GAKO14976 1311 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 TMEM88BA6NKF7 163 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 STK10O94804 968 aaKnown RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ECHS1P30084 290 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 NPTX2P47972 431 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 IRX1P78414 480 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-202ENST00000379826 KLC1Q07866 573 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 TEX2Q8IWB9 1127 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 FBXO36Q8NEA4 188 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 FEZF2Q8TBJ5 459 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 RAB3IL1Q8TBN0 382 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 ACAP3Q96P50 834 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 APOL6Q9BWW8 343 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 KIAA1683Q9H0B3 1180 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 SMYD2Q9NRG4 433 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
SMAD9-202ENST00000379826 WEE2P0C1S8 567 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 GYS1P13807 737 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 FMO1Q01740 532 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 PTK6Q13882 451 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 SPRED3Q2MJR0 410 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 TKFCQ3LXA3 575 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 TTC8Q8TAM2 541 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 AGR3Q8TD06 166 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 PPP1R36Q96LQ0 422 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 DDX56Q9NY93 547 aaKnown RBP11.96□□□□□ -0.49
SMAD9-202ENST00000379826 PSTPIP1O43586 416 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 MTFR1Q15390 333 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMAD9-202ENST00000379826 ANKRD20A2Q5SQ80 823 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 ANKRD20A1Q5TYW2 823 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 ZDHHC24Q6UX98 284 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 FASTKD5Q7L8L6 764 aaKnown RBP11.96□□□□□ -0.49
SMAD9-202ENST00000379826 NUDCD3Q8IVD9 361 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 CCDC97Q96F63 343 aaPredicted RBP11.96□□□□□ -0.49
SMAD9-202ENST00000379826 GRHL1Q9NZI5 618 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 ZFATQ9P243 1243 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 ALS2Q96Q42 1657 aa11.96□□□□□ -0.49
SMAD9-202ENST00000379826 M0QYV0 167 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 PIK3CDO00329 1044 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 NFIBO00712 420 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 BZW1Q7L1Q6 419 aaKnown RBP11.96□□□□□ -0.5
SMAD9-202ENST00000379826 CCDC124Q96CT7 223 aaKnown RBP11.96□□□□□ -0.5
SMAD9-202ENST00000379826 SH3GL3Q99963 347 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 TMEM39BQ9GZU3 492 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 NRBP2Q9NSY0 501 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 ZDHHC18Q9NUE0 388 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 DNPEPQ9ULA0 475 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 PCDHA10Q9Y5I2 948 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 CFLARO15519 480 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 ZWINTO95229 277 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 GRAMD1BQ3KR37 738 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 SLFN11Q7Z7L1 901 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 TRIM42Q8IWZ5 723 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 SCYL1Q96KG9 808 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 RIT2Q99578 217 aa11.96□□□□□ -0.5
SMAD9-202ENST00000379826 A6NJR5 290 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 PSMD10O75832 226 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 KRT37O76014 449 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 CYP1A2P05177 515 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SNHG28P0DPA3 235 aa11.95□□□□□ -0.5
SMAD9-202ENST00000379826 TBXAS1P24557 533 aaPredicted RBP11.95□□□□□ -0.5
SMAD9-202ENST00000379826 SFNP31947 248 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms