RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 BEST2Q8NFU1 509 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 TMEM176AQ96HP8 235 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 NAP1L3Q99457 506 aaPredicted RBP16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 PARVAQ9NVD7 372 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 TUBGCP4Q9UGJ1 667 aa16.36■□□□□ 0.21
RAB3IP-204ENST00000378815 MAP2K7O14733 419 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 CALB1P05937 261 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 MYBL2P10244 700 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 ITGA4P13612 1032 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 TNFRSF8P28908 595 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 PTPN11Q06124 597 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 MAP9Q49MG5 647 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 DENND1BQ6P3S1 775 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 SERINC5Q86VE9 423 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 SESTD1Q86VW0 696 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 TTC39CQ8N584 583 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 C18orf25Q96B23 403 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 TSPAN18Q96SJ8 248 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 BARX2Q9UMQ3 279 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 CEP83Q9Y592 693 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 TCRBV5S1A1TA0A578 114 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 ASGR1P07306 291 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 GLI1P08151 1106 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 CST5P28325 142 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 GLRA4Q5JXX5 417 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 RPAINQ86UA6 219 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 LRRC52Q8N7C0 313 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 WNT8BQ93098 351 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 HINFPQ9BQA5 517 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 APOL6Q9BWW8 343 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 RNF39Q9H2S5 420 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 CREBZFQ9NS37 354 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 SRRDQ9UH36 339 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 TRPV2Q9Y5S1 764 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 CDY2AQ9Y6F7 541 aa16.35■□□□□ 0.21
RAB3IP-204ENST00000378815 SPDYE4A6NLX3 237 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 M0QZ92 97 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 PPEF2O14830 753 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 RAD51CO43502 376 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 PROSCO94903 275 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 KCNE1P15382 129 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 ORC1Q13415 861 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 KCNA10Q16322 511 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 RSPH3Q86UC2 560 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 SMG8Q8ND04 991 aaKnown RBP16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 GDF3Q9NR23 364 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 UBQLN1Q9UMX0 589 aaKnown RBP16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 NR2E1Q9Y466 385 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 IPPQ9Y573 584 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 SMIM28A0A1B0GU29 152 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 SART1O43290 800 aaKnown RBP16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 PYGMP11217 842 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 RWDD2BP57060 319 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 MAP3K21Q5TCX8 1036 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 C9orf57Q5W0N0 161 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 AADACL2Q6P093 401 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 HDXQ7Z353 690 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 FEZF2Q8TBJ5 459 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 SENP6Q9GZR1 1112 aaPredicted RBP16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 SLITRK6Q9H5Y7 841 aa16.34■□□□□ 0.21
RAB3IP-204ENST00000378815 TLR3O15455 904 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 HEXIM1O94992 359 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 NDST1P52848 882 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 FAM47CQ5HY64 1035 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 ERICH1Q86X53 443 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 DDX47Q9H0S4 455 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 CYTH4Q9UIA0 394 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 GRIN2DO15399 1336 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 TMEM191CA6NGB0 347 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 CHRNA1P02708 482 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 HMGCRP04035 888 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 RPLP2P05387 115 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 VDRP11473 427 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 IFT20Q8IY31 132 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 GSPT2Q8IYD1 628 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 AENQ8WTP8 325 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 KLK14Q9P0G3 267 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 PARP2Q9UGN5 583 aa16.33■□□□□ 0.2
RAB3IP-204ENST00000378815 O00370 1275 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 CD4P01730 458 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 HSPA6P17066 643 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 MAN1A1P33908 653 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 CNGA2Q16280 664 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 PTPN20Q4JDL3 420 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 PPP1R15BQ5SWA1 713 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 SEL1L2Q5TEA6 688 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 TWF2Q6IBS0 349 aaKnown RBP16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 ARRDC4Q8NCT1 418 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 HEXIM2Q96MH2 286 aaKnown RBP16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 RNF19AQ9NV58 838 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 KIAA1257Q9ULG3 409 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 STRIP2Q9ULQ0 834 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 CENPFP49454 3210 aa16.32■□□□□ 0.2
RAB3IP-204ENST00000378815 BHMG1C9JSJ3 638 aaPredicted RBP16.31■□□□□ 0.2
RAB3IP-204ENST00000378815 PIRO00625 290 aa16.31■□□□□ 0.2
RAB3IP-204ENST00000378815 RPS6KA5O75582 802 aa16.31■□□□□ 0.2
RAB3IP-204ENST00000378815 TRPA1O75762 1119 aa16.31■□□□□ 0.2
RAB3IP-204ENST00000378815 MICAL2O94851 1124 aa16.31■□□□□ 0.2
RAB3IP-204ENST00000378815 GJB6O95452 261 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms