RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 AXLP30530 894 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 CDH8P55286 799 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 NOMO3P69849 1222 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 SKOR1P84550 965 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 KCTD16Q68DU8 428 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 USP38Q8NB14 1042 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 ACTRT1Q8TDG2 376 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 FAXDC2Q96IV6 333 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 BTBD6Q96KE9 485 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 KRT12Q99456 494 aa20.65■□□□□ 0.9
SSU72-204ENST00000378726 TRIM6Q9C030 488 aaPredicted RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 UPF3AQ9H1J1 476 aaKnown RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 TRIP12Q14669 1992 aaPredicted RBP20.65■□□□□ 0.9
SSU72-204ENST00000378726 EBAG9O00559 213 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 DDX3YO15523 660 aaKnown RBP20.64■□□□□ 0.89
SSU72-204ENST00000378726 RAP1GAPP47736 663 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 RBP5P82980 135 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 C2CD6Q53TS8 623 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 PHLDB2Q86SQ0 1253 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 TRIM11Q96F44 468 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 HPDLQ96IR7 371 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 BCO2Q9BYV7 579 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 CXCL16Q9H2A7 254 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 VRTNQ9H8Y1 702 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 ITGA11Q9UKX5 1188 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 PIN4Q9Y237 131 aaKnown RBP20.64■□□□□ 0.89
SSU72-204ENST00000378726 FAM169AQ9Y6X4 670 aa20.64■□□□□ 0.89
SSU72-204ENST00000378726 A0A087WUV0 522 aaPredicted RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 MYBL1P10243 752 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 RRM1P23921 792 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 BRD2P25440 801 aaKnown RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 YARSP54577 528 aaKnown RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 PDCLQ13371 301 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 TRADDQ15628 312 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 TAF2Q6P1X5 1199 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 TADA2BQ86TJ2 420 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 REM2Q8IYK8 340 aaPredicted RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 IQCKQ8N0W5 287 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 CASKIN2Q8WXE0 1202 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 PIK3R5Q8WYR1 880 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 RPS6KC1Q96S38 1066 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 ELNP15502 786 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 COMTP21964 271 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 CCND3P30281 292 aaPredicted RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 SMYD5Q6GMV2 418 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 MON1BQ7L1V2 547 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 ZSWIM1Q9BR11 485 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 AVENQ9NQS1 362 aaPredicted RBP20.63■□□□□ 0.89
SSU72-204ENST00000378726 ADAM22Q9P0K1 906 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 GTF2IRD1Q9UHL9 959 aa20.63■□□□□ 0.89
SSU72-204ENST00000378726 MYCNP04198 464 aaPredicted RBP20.62■□□□□ 0.89
SSU72-204ENST00000378726 ATP1A2P50993 1020 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 RASGEF1CQ8N431 466 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 VCPIP1Q96JH7 1222 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 ZMAT2Q96NC0 199 aaKnown RBP20.62■□□□□ 0.89
SSU72-204ENST00000378726 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.62■□□□□ 0.89
SSU72-204ENST00000378726 CELF4Q9BZC1 486 aaKnown RBP20.62■□□□□ 0.89
SSU72-204ENST00000378726 SDCBP2Q9H190 292 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 XPNPEP3Q9NQH7 507 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 CPP00450 1065 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 PAK2Q13177 524 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 CFAP58Q5T655 872 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 PHF13Q86YI8 300 aaPredicted RBP20.62■□□□□ 0.89
SSU72-204ENST00000378726 MICALL1Q8N3F8 863 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 TFAP2BQ92481 460 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 C11orf70Q9BRQ4 267 aa20.62■□□□□ 0.89
SSU72-204ENST00000378726 NXF3Q9H4D5 531 aaKnown RBP20.62■□□□□ 0.89
SSU72-204ENST00000378726 MIF4GDA9UHW6 222 aaKnown RBP20.61■□□□□ 0.89
SSU72-204ENST00000378726 ADAMTS4O75173 837 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 TRPA1O75762 1119 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 P4HA1P13674 534 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 PRKAR2AP13861 404 aaKnown RBP20.61■□□□□ 0.89
SSU72-204ENST00000378726 NKX3-2P78367 333 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 FAM47CQ5HY64 1035 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 LIN9Q5TKA1 542 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 GDF6Q6KF10 455 aaPredicted RBP20.61■□□□□ 0.89
SSU72-204ENST00000378726 PPP1R2P3Q6NXS1 205 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 LLGL2Q6P1M3 1020 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 SNX27Q96L92 541 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 APOL6Q9BWW8 343 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 FAM107BQ9H098 131 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 SMYD3Q9H7B4 428 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 DERAQ9Y315 318 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 PGRMC1O00264 195 aaKnown RBP20.61■□□□□ 0.89
SSU72-204ENST00000378726 AKAP5P24588 427 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 ALKAL1Q6UXT8 129 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 UBL4BQ8N7F7 174 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 CARD9Q9H257 536 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 CYP3A43Q9HB55 503 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 ANAPC7Q9UJX3 599 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 TMEM59LQ9UK28 342 aa20.61■□□□□ 0.89
SSU72-204ENST00000378726 RECQL4O94761 1208 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 ASGR1P07306 291 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 CD19P15391 556 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 RAD23BP54727 409 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 ZBTB6Q15916 424 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 KCNA10Q16322 511 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 DCAF12L1Q5VU92 463 aa20.6■□□□□ 0.89
SSU72-204ENST00000378726 MMS22LQ6ZRQ5 1243 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms