RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 TNNC1P63316 161 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 CREBRFQ8IUR6 639 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 ADGRF2Q8IZF7 708 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 ZNF461Q8TAF7 563 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 KBTBD7Q8WVZ9 684 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 CASP10Q92851 521 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 HLA-CQ95604 372 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 ELMO3Q96BJ8 720 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 PI4K2AQ9BTU6 479 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 APOBEC3GQ9HC16 384 aaKnown RBP20.09■□□□□ 0.81
SSU72-203ENST00000378725 FANCLQ9NW38 375 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 POLIQ9UNA4 740 aa20.09■□□□□ 0.81
SSU72-203ENST00000378725 KCNJ18B7U540 433 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 P4HA1P13674 534 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 EEF1GP26641 437 aaKnown RBP20.08■□□□□ 0.81
SSU72-203ENST00000378725 MTIF2P46199 727 aaKnown RBP20.08■□□□□ 0.81
SSU72-203ENST00000378725 ROR1Q01973 937 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 DLX2Q07687 328 aaPredicted RBP20.08■□□□□ 0.81
SSU72-203ENST00000378725 KCNJ12Q14500 433 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 TCP11X2Q5H9J9 407 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 SPOPLQ6IQ16 392 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 LLGL2Q6P1M3 1020 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 OSTM1Q86WC4 334 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 CCDC150Q8NCX0 1101 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 OR10T2Q8NGX3 314 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 LMO3Q8TAP4 145 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 ACBD6Q9BR61 282 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 IMPG2Q9BZV3 1241 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 ZCWPW1Q9H0M4 648 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 PLEKHA4Q9H4M7 779 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 UBE2ZQ9H832 354 aaPredicted RBP20.08■□□□□ 0.81
SSU72-203ENST00000378725 MAFFQ9ULX9 164 aa20.08■□□□□ 0.81
SSU72-203ENST00000378725 MYO7AQ13402 2215 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 WDR27A2RRH5 827 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 TBX10O75333 385 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 SRGAP2BP0DMP2 458 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 ZNF165P49910 485 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 NOP14P78316 857 aaKnown RBP20.07■□□□□ 0.8
SSU72-203ENST00000378725 MYL7Q01449 175 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 CETN1Q12798 172 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 GPR17Q13304 367 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 MAN2A1Q16706 1144 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 WDR44Q5JSH3 913 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 TPGS2Q68CL5 300 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 ANKRD54Q6NXT1 300 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 DHX40Q8IX18 779 aaKnown RBP20.07■□□□□ 0.8
SSU72-203ENST00000378725 MSLNLQ96KJ4 702 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 TMEM209Q96SK2 561 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 MRPL45Q9BRJ2 306 aaKnown RBP20.07■□□□□ 0.8
SSU72-203ENST00000378725 TUBGCP2Q9BSJ2 902 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 BCO2Q9BYV7 579 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 HSD3B7Q9H2F3 369 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 DZANK1Q9NVP4 752 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 DDX43Q9NXZ2 648 aaKnown RBP20.07■□□□□ 0.8
SSU72-203ENST00000378725 DPP7Q9UHL4 492 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 FBXW11Q9UKB1 542 aa20.07■□□□□ 0.8
SSU72-203ENST00000378725 SMTNL1A8MU46 457 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 PAPLNO95428 1278 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 CAVIN2O95810 425 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 SPATA31D3P0C874 917 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 ATF2P15336 505 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 ZNF18P17022 549 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 HOXB8P17481 243 aaPredicted RBP20.06■□□□□ 0.8
SSU72-203ENST00000378725 LMO2P25791 158 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 GNL1P36915 607 aaPredicted RBP20.06■□□□□ 0.8
SSU72-203ENST00000378725 ASPAP45381 313 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 CDH8P55286 799 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 ARPP19P56211 112 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 IQCB1Q15051 598 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 HSP90AA4PQ58FG1 418 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 MIIPQ5JXC2 388 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 SPATA31D4Q6ZUB0 917 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 RTL10Q7L3V2 364 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 LRRTM3Q86VH5 581 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 AOPEPQ8N6M6 819 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 KREMEN2Q8NCW0 462 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 EHBP1Q8NDI1 1231 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 SDCBP2Q9H190 292 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 SMYD3Q9H7B4 428 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 CYP3A43Q9HB55 503 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 PRDM6Q9NQX0 595 aa20.06■□□□□ 0.8
SSU72-203ENST00000378725 AFF4Q9UHB7 1163 aaKnown RBP20.06■□□□□ 0.8
SSU72-203ENST00000378725 BARX2Q9UMQ3 279 aaPredicted RBP20.06■□□□□ 0.8
SSU72-203ENST00000378725 LRRC10BA6NIK2 292 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 OR4Q2P0C623 313 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 PCSK1P29120 753 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 UVSSAQ2YD98 709 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 VWA3BQ502W6 1294 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 SYCE2Q6PIF2 218 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 RNF19BQ6ZMZ0 732 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 TATDN2Q93075 761 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 PKMYT1Q99640 499 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 NIF3L1Q9GZT8 377 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 S1PR5Q9H228 398 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 SNX25Q9H3E2 840 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 NDST4Q9H3R1 872 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.05■□□□□ 0.82e-6■■■■■ 173.4
SSU72-203ENST00000378725 MAN1C1Q9NR34 630 aa20.05■□□□□ 0.8
SSU72-203ENST00000378725 NME7Q9Y5B8 376 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms