RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 BMP6P22004 513 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SPRP35270 261 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 GEMIN4P57678 1058 aaKnown RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 EFHC1Q5JVL4 640 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 CYP4A22Q5TCH4 519 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LCA5Q86VQ0 697 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 FAM71DQ8N9W8 422 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LRRN4CLQ8ND94 238 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SYTL5Q8TDW5 730 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 ASAP3Q8TDY4 903 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 FRMD8P1Q9BZ68 369 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 ZNF518BQ9C0D4 1074 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 TRPV6Q9H1D0 765 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 METTL5Q9NRN9 209 aaKnown RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 RNF103-CHMP3A0A140T963 221 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 PJA2O43164 708 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 ENO1P06733 434 aaKnown RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 RECQLP46063 649 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 BACE1P56817 501 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SNAPC2Q13487 334 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 CUL3Q13618 768 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LAMC2Q13753 1193 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 C11orf63Q6NUN7 778 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 CDC26Q8NHZ8 85 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 GTF3C2Q8WUA4 911 aaPredicted RBP11.82□□□□□ -0.52
RPGR-203ENST00000378505 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 OSBPL1AQ9BXW6 950 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
RPGR-203ENST00000378505 NFIBO00712 420 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 PROSCO94903 275 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 CYP2C8P10632 490 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 ALDH18A1P54886 795 aaKnown RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 PTENP60484 403 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 MCL1Q07820 350 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 MTM1Q13496 603 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 ZNF235Q14590 738 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 MFSD14CQ5VZR4 134 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 AGR3Q8TD06 166 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 MRPL46Q9H2W6 279 aaKnown RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 XAB2Q9HCS7 855 aaKnown RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 PCMTD2Q9NV79 361 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 HACL1Q9UJ83 578 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 KIAA1257Q9ULG3 409 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 GRID1Q9ULK0 1009 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 RARRES1P49788 294 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 CYP24A1Q07973 514 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 HABP4Q5JVS0 413 aaKnown RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 LRRC6Q86X45 466 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 KIRREL3Q8IZU9 778 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 SLC20A1Q8WUM9 679 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 ANLNQ9NQW6 1124 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 RIMBP3CA6NJZ7 1639 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 RIMBP3BA6NNM3 1639 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 RIMBP3Q9UFD9 1639 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 ITGB3P05106 788 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 KRT4P19013 534 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 CCND1P24385 295 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 DNAJC3Q13217 504 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 TMCO4Q5TGY1 634 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 LONP2Q86WA8 852 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 CDR2LQ86X02 465 aaPredicted RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 MTMR9Q96QG7 549 aa11.81□□□□□ -0.52
RPGR-203ENST00000378505 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.81□□□□□ -0.52
RPGR-203ENST00000378505 MARCOQ9UEW3 520 aaPredicted RBP11.81□□□□□ -0.52
RPGR-203ENST00000378505 E5RI56 91 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 EEF2KO00418 725 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 CES2O00748 559 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 MTSS1O43312 755 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TRAPPC3O43617 180 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 POLBP06746 335 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 STMN1P16949 149 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 CTCFP49711 727 aaPredicted RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 ICA1LQ8NDH6 482 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 PPHLN1Q8NEY8 458 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 CGRRF1Q99675 332 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 AGO4Q9HCK5 861 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 MYOM1P52179 1685 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 FAM86B1E9PN63 330 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SLITRK3O94933 977 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 FAM86B2P0C5J1 330 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 CYP2C9P11712 490 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 PCSK1P29120 753 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 SEZ6Q53EL9 994 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 C2CD6Q53TS8 623 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TFDP3Q5H9I0 405 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 RARS2Q5T160 578 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 RFX8Q6ZV50 586 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 OTOP1Q7RTM1 612 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 FAM83AQ86UY5 434 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 EXD1Q8NHP7 514 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 EPS8L3Q8TE67 593 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 POP1Q99575 1024 aaKnown RBP11.8□□□□□ -0.52
RPGR-203ENST00000378505 KATNAL1Q9BW62 490 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 RRN3P2A6NIE6 340 aa11.8□□□□□ -0.52
RPGR-203ENST00000378505 TNPO2O14787 897 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms