RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SLC10A4Q96EP9 437 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 SNF8Q96H20 258 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 GCNAQ96QF7 691 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 C17orf80Q9BSJ5 609 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 CCSER1Q9C0I3 900 aa12.33□□□□□ -0.44
NPHP4-202ENST00000378161 EVPLLA8MZ36 301 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 TNPO2O14787 897 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 XRCC5P13010 732 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 VCLP18206 1134 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 HOXA7P31268 230 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 NT5C2P49902 561 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 DLG4P78352 724 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 XIAPP98170 497 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 TRMT1LQ7Z2T5 733 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 RASGRP4Q8TDF6 673 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 CKAP2Q8WWK9 683 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF317Q96PQ6 595 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SPOCK3Q9BQ16 436 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 TRIM51Q9BSJ1 452 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ADNPQ9H2P0 1102 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 RIC8AQ9NPQ8 531 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 GMIPQ9P107 970 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 INO80B-WBP1J3KQ70 363 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 DNALI1O14645 258 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 MTSS1O43312 755 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 BCL10O95999 233 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ITGAXP20702 1163 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 CASP1P29466 404 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 RASA2Q15283 850 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 CYP2U1Q7Z449 544 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 GALNT7Q86SF2 657 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 GAB3Q8WWW8 586 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 FERD3LQ96RJ6 166 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 DNAJC7Q99615 494 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 CHID1Q9BWS9 393 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 HEY2Q9UBP5 337 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 PCDHA12Q9UN75 941 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 GDAQ9Y2T3 454 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 MTO1Q9Y2Z2 717 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 EXOC1LA0A1B0GW35 172 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 POTECB2RU33 542 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 MAP3K13O43283 966 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 TBX10O75333 385 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 PABPC1P11940 636 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 STAT1P42224 750 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SERPINB10P48595 397 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 FKBP3Q00688 224 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SCRN3Q0VDG4 424 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 E2F2Q14209 437 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 OXER1Q8TDS5 423 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 LARP4BQ92615 738 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 PSKH2Q96QS6 385 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF277Q9NRM2 450 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 HERC5Q9UII4 1024 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ZNF335Q9H4Z2 1342 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 FBXO21O94952 628 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 HOXA10P31260 410 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ADCY8P40145 1251 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ENTPD1P49961 510 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 STK11Q15831 433 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 MAPK6Q16659 721 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 FAM98CQ17RN3 349 aaKnown RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ZC2HC1CQ53FD0 456 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 RNF25Q96BH1 459 aaPredicted RBP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 ACAT2Q9BWD1 397 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 RHOBTB2Q9BYZ6 727 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SHCBP1LQ9BZQ2 653 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SEC31BQ9NQW1 1179 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 STRIP2Q9ULQ0 834 aa12.32□□□□□ -0.44
NPHP4-202ENST00000378161 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.32□□□□□ -0.44
NPHP4-202ENST00000378161 JCADQ9P266 1359 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PDS5AQ29RF7 1337 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PLEKHA8P1O95397 391 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 GJB6O95452 261 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CCNB1P14635 433 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 NEK3P51956 506 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 BBS9Q3SYG4 887 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 NADK2Q4G0N4 442 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PPWD1Q96BP3 646 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SERPINB12Q96P63 405 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SLX1AQ9BQ83 275 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 EFHD1Q9BUP0 239 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 RNPEPQ9H4A4 650 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PTPN22Q9Y2R2 807 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 KDM6AO15550 1401 aaPredicted RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ADGRA3Q8IWK6 1321 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CEP170BQ9Y4F5 1589 aaPredicted RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 CLK3P49761 638 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 EIF6P56537 245 aaKnown RBP12.31□□□□□ -0.44
NPHP4-202ENST00000378161 PDIA6Q15084 440 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SLC10A5Q5PT55 438 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 NEPROQ6NW34 567 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 ARHGAP27Q6ZUM4 889 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 APPL2Q8NEU8 664 aa12.31□□□□□ -0.44
NPHP4-202ENST00000378161 SCFD1Q8WVM8 642 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms