RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 UPF3AQ9H1J1 476 aaKnown RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 GPRC5CQ9NQ84 441 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 GGT7Q9UJ14 662 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 ANAPC7Q9UJX3 599 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 NCKAP1Q9Y2A7 1128 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 UBA6A0AVT1 1052 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 NFIBO00712 420 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 TTI1O43156 1089 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 TPI1P60174 286 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 PROM2Q8N271 834 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 ZC3H15Q8WU90 426 aaKnown RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 ATP1A1P05023 1023 aaKnown RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 ARP10275 920 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 TAC1P20366 129 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 AP2B1P63010 937 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 MFSD4BQ5TF39 518 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 COG1Q8WTW3 980 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 SENP7Q9BQF6 1050 aa11.34□□□□□ -0.59
HIF3A-205ENST00000377670 WARS2Q9UGM6 360 aaKnown RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 UBQLN1Q9UMX0 589 aaKnown RBP11.34□□□□□ -0.59
HIF3A-205ENST00000377670 F5H423 210 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 WNT10BO00744 389 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 GAS2O43903 313 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 RAB27AP51159 221 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 ERVK-24P63145 666 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 AP1B1Q10567 949 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CNOT8Q9UFF9 292 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 MEFVO15553 781 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 MED24O75448 989 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 WEE1P30291 646 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 ZBTB41Q5SVQ8 909 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 APOBEC3HQ6NTF7 200 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 IL17RAQ96F46 866 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 POLR3CQ9BUI4 534 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CIPCQ9C0C6 399 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CCDC195A0A1B0GUA6 201 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 COPEO14579 308 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 MAN1A2O60476 641 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 HSPA4LO95757 839 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 SYF2O95926 243 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 SLC9A1P19634 815 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 GRK4P32298 578 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 IMPG1Q17R60 797 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 TAF1BQ53T94 588 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CERS5Q8N5B7 392 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 ASAP3Q8TDY4 903 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CCDC124Q96CT7 223 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 OLFM3Q96PB7 478 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 SYNDIG1LA6NDD5 238 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 DDX5P17844 614 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CCL23P55773 120 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 MFSD10Q14728 455 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 KIZQ2M2Z5 673 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 RIC1Q4ADV7 1423 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 WDR48Q8TAF3 677 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 RNPC3Q96LT9 517 aaKnown RBP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 NDE1Q9NXR1 346 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.33□□□□□ -0.6
HIF3A-205ENST00000377670 PCDHB9Q9Y5E1 797 aa11.33□□□□□ -0.6
HIF3A-205ENST00000377670 CYP26A1O43174 497 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CTIFO43310 598 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 RHOBTB3O94955 611 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 GHRP10912 638 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SMAD1Q15797 465 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SHROOM1Q2M3G4 852 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 NBPF20Q3BBV1 942 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ANKRD7Q92527 254 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 IFT172Q9UG01 1749 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF185O15231 689 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 FTLP02792 175 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 PRKAR2AP13861 404 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 TWF1Q12792 350 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ACVR2BQ13705 512 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CCDC92Q53HC0 331 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 LRP10Q7Z4F1 713 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SLC30A5Q8TAD4 765 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 RIN2Q8WYP3 895 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 C7orf25Q9BPX7 421 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 RUSC1Q9BVN2 902 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 VTA1Q9NP79 307 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 PCSK1NQ9UHG2 260 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 APOBEC2Q9Y235 224 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CFAP99D6REC4 459 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 HADHAP40939 763 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 IRX1P78414 480 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 LBRQ14739 615 aaKnown RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 SLC45A4Q5BKX6 768 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 E4F1Q66K89 784 aaPredicted RBP11.32□□□□□ -0.6
HIF3A-205ENST00000377670 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 ZBTB18Q99592 522 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 TRIM15Q9C019 465 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 UNC45AQ9H3U1 944 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 CHST12Q9NRB3 414 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 MID2Q9UJV3 735 aa11.32□□□□□ -0.6
HIF3A-205ENST00000377670 DIS3Q9Y2L1 958 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms