RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 PPANQ9NQ55 473 aaKnown RBP10.17□□□□□ -0.78
TRIM39-202ENST00000376659 NLRC5Q86WI3 1866 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 TOM1L1O75674 476 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ENDOD1O94919 500 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 IL1R2P27930 398 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 BAG6P46379 1132 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 LIG3P49916 1009 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 MYL6P60660 151 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ITIH4Q14624 930 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ICE2Q659A1 982 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 TMEM270Q6UE05 265 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ARMC9Q7Z3E5 817 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 MICALL1Q8N3F8 863 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 PHACTR1Q9C0D0 580 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ANKFY1Q9P2R3 1169 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 NME7Q9Y5B8 376 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 PTPRDP23468 1912 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 SATB1Q01826 763 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 CAV1Q03135 178 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 LONRF1Q17RB8 773 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 FBXW10Q5XX13 1052 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 TRMT1LQ7Z2T5 733 aaKnown RBP10.17□□□□□ -0.78
TRIM39-202ENST00000376659 PHLDB2Q86SQ0 1253 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 CCDC105Q8IYK2 499 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 ATL2Q8NHH9 583 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 OSBPL8Q9BZF1 889 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 LHX5Q9H2C1 402 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 PARVAQ9NVD7 372 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 HMGXB4Q9UGU5 601 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 MTUS1Q9ULD2 1270 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 SCINQ9Y6U3 715 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 IVNS1ABPQ9Y6Y0 642 aa10.17□□□□□ -0.78
TRIM39-202ENST00000376659 DNAJC8O75937 253 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 C22orf31O95567 290 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 NSFP46459 744 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 AP3M2P53677 418 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 XRCC4Q13426 336 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 RASA2Q15283 850 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PTPN20Q4JDL3 420 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 EAPPQ56P03 285 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 POLNQ7Z5Q5 900 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 LRRC34Q8IZ02 419 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PLAC1Q9HBJ0 212 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 CISHQ9NSE2 258 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 MYLKQ15746 1914 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 GOLGA6L10A6NI86 522 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 F8VP50 259 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 K7ERI5 159 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 B4GALT5O43286 388 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 GH1P01241 217 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ITGAVP06756 1048 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PFKMP08237 780 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 CD58P19256 250 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 RAD23BP54727 409 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 COPS2P61201 443 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 MFSD7Q6UXD7 560 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 SPOCD1Q6ZMY3 1216 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 TRIM50Q86XT4 487 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 AGGF1Q8N302 714 aaeCLIP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 RNF217Q8TC41 542 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 TWNKQ96RR1 684 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ZNF518BQ9C0D4 1074 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 NIF3L1Q9GZT8 377 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 RBPJLQ9UBG7 517 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 DRG1Q9Y295 367 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ACTL7BQ9Y614 415 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 BRCA2P51587 3418 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 E7ESA3 106 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 DNALI1O14645 258 aaPredicted RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 OGTO15294 1046 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 GAS2O43903 313 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ERLIN2O94905 339 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 FGFR1P11362 822 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 EIF4BP23588 611 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 SNX1Q13596 522 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 FASTKD3Q14CZ7 662 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PPP1R2P3Q6NXS1 205 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 DENND1BQ6P3S1 775 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ZBTB10Q96DT7 871 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PRMT1Q99873 361 aaKnown RBP10.16□□□□□ -0.78
TRIM39-202ENST00000376659 FAM118BQ9BPY3 351 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 UBN1Q9NPG3 1134 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 ADAM22Q9P0K1 906 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 PCDHB4Q9Y5E5 795 aa10.16□□□□□ -0.78
TRIM39-202ENST00000376659 RBM47A0AV96 593 aaKnown RBP10.15□□□□□ -0.78
TRIM39-202ENST00000376659 MAGEB2O15479 319 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 HOXD8P13378 290 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-202ENST00000376659 HNRNPH1P31943 449 aaKnown RBP10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SLC18A1P54219 525 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 STRN3Q13033 797 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 XYLT1Q86Y38 959 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 FNIP1Q8TF40 1166 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 MAIP1Q8WWC4 291 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 PRCCQ92733 491 aaPredicted RBP10.15□□□□□ -0.78
TRIM39-202ENST00000376659 CYLDQ9NQC7 956 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 SH3BP1Q9Y3L3 701 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 CLUHO75153 1309 aa10.15□□□□□ -0.78
TRIM39-202ENST00000376659 LRRIQ4A6NIV6 560 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms