RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KCNK9Q9NPC2 374 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 BRCA1P38398 1863 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 FAM47DPA6NHR8 397 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ALOX15BO15296 676 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TJP3O95049 919 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ASS1P00966 412 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ITGAVP06756 1048 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 DPEP1P16444 411 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 MAP2K2P36507 400 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 WDR72Q3MJ13 1102 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ATP13A4Q4VNC1 1196 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ZC3H12AQ5D1E8 599 aaKnown RBP11.29□□□□□ -0.6
ABCF1-202ENST00000376545 TLDC1Q6P9B6 456 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 PRUNE1Q86TP1 453 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 SCYL3Q8IZE3 742 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ANKRD42Q8N9B4 389 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 FAM118BQ9BPY3 351 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF518BQ9C0D4 1074 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 ECT2Q9H8V3 914 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 PPCSQ9HAB8 311 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 EBF2Q9HAK2 575 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 STARD13Q9Y3M8 1113 aa11.29□□□□□ -0.6
ABCF1-202ENST00000376545 hCG_1818297A0A087WSY0 165 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 C3orf70A6NLC5 250 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 K7ERI5 159 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 CALB1P05937 261 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 STX2P32856 288 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 VPS41P49754 854 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 POLGP54098 1239 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 NCOA4Q13772 614 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 NEDD9Q14511 834 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 GNPTABQ3T906 1256 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 RNASEH2BQ5TBB1 312 aaKnown RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 MFSD7Q6UXD7 560 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 SPOCD1Q6ZMY3 1216 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 TMEM143Q96AN5 459 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 MSTO1Q9BUK6 570 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 FETUBQ9UGM5 382 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 PCDHGC3Q9UN70 934 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 MGAMO43451 1857 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 NDC80O14777 642 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 OGDHQ02218 1023 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 TAP1Q03518 808 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 TAZQ16635 292 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 SRRM1Q8IYB3 904 aaKnown RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 WDTC1Q8N5D0 677 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF280CQ8ND82 737 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 GDAP1Q8TB36 358 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 RMDN2Q96LZ7 410 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 CAMKK2Q96RR4 588 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 TARS2Q9BW92 718 aaKnown RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 ZNF302Q9NR11 478 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 FBXO40Q9UH90 709 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 EFR3BQ9Y2G0 817 aa11.28□□□□□ -0.6
ABCF1-202ENST00000376545 FARP1Q9Y4F1 1045 aaPredicted RBP11.28□□□□□ -0.6
ABCF1-202ENST00000376545 A0A1B0GUA9 196 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 RASA4BC9J798 803 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 RASA4O43374 803 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 CST3P01034 146 aaPredicted RBP11.27□□□□□ -0.6
ABCF1-202ENST00000376545 KRT10P13645 584 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 PTPRAP18433 802 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 RFC5P40937 340 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 CETN2P41208 172 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 CDKN2BP42772 138 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 VCPP55072 806 aaKnown RBP11.27□□□□□ -0.6
ABCF1-202ENST00000376545 KCNJ2P63252 427 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 ZPBP2Q6X784 338 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.6
ABCF1-202ENST00000376545 WDR49Q8IV35 697 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 SLC35B2Q8TB61 432 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 ACAD9Q9H845 621 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 AS3MTQ9HBK9 375 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 MLXIPLQ9NP71 852 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 SSU72Q9NP77 194 aaKnown RBP11.27□□□□□ -0.6
ABCF1-202ENST00000376545 DDX56Q9NY93 547 aaKnown RBP11.27□□□□□ -0.6
ABCF1-202ENST00000376545 NKIRAS1Q9NYS0 192 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 SENP1Q9P0U3 644 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 TBK1Q9UHD2 729 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 IVNS1ABPQ9Y6Y0 642 aa11.27□□□□□ -0.6
ABCF1-202ENST00000376545 PECAM1P16284 738 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-202ENST00000376545 EIF4BP23588 611 aaKnown RBP11.27□□□□□ -0.61
ABCF1-202ENST00000376545 RPS12P25398 132 aaKnown RBP11.27□□□□□ -0.61
ABCF1-202ENST00000376545 IL9RQ01113 521 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 MOGSQ13724 837 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-202ENST00000376545 TFDP3Q5H9I0 405 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 CATSPERGQ6ZRH7 1159 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 SEPT14Q6ZU15 432 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 POLNQ7Z5Q5 900 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 ECHDC2Q86YB7 292 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 L3MBTL3Q96JM7 780 aaPredicted RBP11.27□□□□□ -0.61
ABCF1-202ENST00000376545 PCYT2Q99447 389 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 USTQ9Y2C2 406 aa11.27□□□□□ -0.61
ABCF1-202ENST00000376545 TYROBPO43914 113 aa11.26□□□□□ -0.61
ABCF1-202ENST00000376545 ADCY3O60266 1144 aa11.26□□□□□ -0.61
ABCF1-202ENST00000376545 SF3A3Q12874 501 aaKnown RBP eCLIP11.26□□□□□ -0.611e-6■■■■□ 22.6
ABCF1-202ENST00000376545 GSTA5Q7RTV2 222 aa11.26□□□□□ -0.61
ABCF1-202ENST00000376545 DNERQ8NFT8 737 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms