RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 FAM173BQ6P4H8 233 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 C1orf228Q6PIY5 440 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 KCNK18Q7Z418 384 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 ATAD1Q8NBU5 361 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 DRC1Q96MC2 740 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 TMEM209Q96SK2 561 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 HAPLN2Q9GZV7 340 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 SMG9Q9H0W8 520 aaKnown RBP14.26□□□□□ -0.13
CLCN6-205ENST00000376492 ATXN3LQ9H3M9 355 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 SMOC1Q9H4F8 434 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 ANGPTL2Q9UKU9 493 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 CLIC4Q9Y696 253 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 MORC2Q9Y6X9 1032 aaPredicted RBP14.26□□□□□ -0.13
CLCN6-205ENST00000376492 FRYQ5TBA9 3013 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 CNOT1A5YKK6 2376 aaKnown RBP14.26□□□□□ -0.13
CLCN6-205ENST00000376492 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
CLCN6-205ENST00000376492 MTMR11A4FU01 709 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 PPEF2O14830 753 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 TOM1L1O75674 476 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 GABRR2P28476 465 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 HOXA6P31267 233 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 LONP1P36776 959 aaKnown RBP14.25□□□□□ -0.13
CLCN6-205ENST00000376492 ALDH1A3P47895 512 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 NUCB2P80303 420 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 CYP4F8P98187 520 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 CACNB1Q02641 598 aaPredicted RBP14.25□□□□□ -0.13
CLCN6-205ENST00000376492 RAD51AP2Q09MP3 1159 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 GPR17Q13304 367 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 CENPPQ6IPU0 288 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 RINT1Q6NUQ1 792 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 C1orf186Q6ZWK4 172 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 DNAJB7Q7Z6W7 309 aaPredicted RBP14.25□□□□□ -0.13
CLCN6-205ENST00000376492 KBTBD6Q86V97 674 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 DDX1Q92499 740 aaKnown RBP14.25□□□□□ -0.13
CLCN6-205ENST00000376492 KIF12Q96FN5 646 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 LPIN3Q9BQK8 851 aa14.25□□□□□ -0.13
CLCN6-205ENST00000376492 POLR3BQ9NW08 1133 aaPredicted RBP14.25□□□□□ -0.13
CLCN6-205ENST00000376492 OR6C75A6NL08 312 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 DPYSL4O14531 572 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 TM4SF5O14894 197 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 FOXD2O60548 495 aaPredicted RBP14.24□□□□□ -0.13
CLCN6-205ENST00000376492 LRPAP1P30533 357 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 TNFSF9P41273 254 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 LIMK1P53667 647 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 MCL1Q07820 350 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 STRN3Q13033 797 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 ARHGAP29Q52LW3 1261 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 HAUS6Q7Z4H7 955 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 USP37Q86T82 979 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 C12orf50Q8NA57 414 aaPredicted RBP14.24□□□□□ -0.13
CLCN6-205ENST00000376492 TMEM161BQ8NDZ6 487 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 PSMG2Q969U7 264 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 PNMA5Q96PV4 448 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 CHMP5Q9NZZ3 219 aa14.24□□□□□ -0.13
CLCN6-205ENST00000376492 TTC26A0AVF1 554 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 RPP40O75818 363 aaKnown RBP14.23□□□□□ -0.13
CLCN6-205ENST00000376492 EPN2O95208 641 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 ZNF806P0C7X5 589 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 MAPTP10636 758 aaKnown RBP14.23□□□□□ -0.13
CLCN6-205ENST00000376492 UBA7P41226 1012 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 RAP1GAPP47736 663 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 GRIN1Q05586 938 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 SLC39A14Q15043 492 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 ZBTB6Q15916 424 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 TMEM119Q4V9L6 283 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 STPG1Q5TH74 334 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 OVOS1Q6IE37 1185 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 DSTYKQ6XUX3 929 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 BPIFB1Q8TDL5 484 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 GAB3Q8WWW8 586 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 CHFRQ96EP1 664 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 USP28Q96RU2 1077 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 OBP2AQ9NY56 170 aa14.23□□□□□ -0.13
CLCN6-205ENST00000376492 SRPRBQ9Y5M8 271 aaKnown RBP14.23□□□□□ -0.13
CLCN6-205ENST00000376492 PDCD11Q14690 1871 aaKnown RBP14.23□□□□□ -0.13
CLCN6-205ENST00000376492 OTOL1A6NHN0 477 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 CLDN3O15551 220 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 ZSCAN22P10073 491 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 PLS3P13797 630 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 ATF6P18850 670 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 MATR3P43243 847 aaKnown RBP eCLIP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 NASPP49321 788 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SHC2P98077 582 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 MYBPC2Q14324 1141 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 ZRSR1Q15695 479 aaKnown RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 ARHGAP15Q53QZ3 475 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 TCEAL6Q6IPX3 200 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 FSTL4Q6MZW2 842 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 ZPBP2Q6X784 338 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 CACNA2D4Q7Z3S7 1137 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SYNPOQ8N3V7 929 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SYT2Q8N9I0 419 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SPRYD3Q8NCJ5 442 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 OR10T2Q8NGX3 314 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SPIRE2Q8WWL2 714 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 TCEAL3Q969E4 200 aa14.22□□□□□ -0.13
CLCN6-205ENST00000376492 SEPT5Q99719 369 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 NTPCRQ9BSD7 190 aaKnown RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 OXCT2Q9BYC2 517 aaPredicted RBP14.22□□□□□ -0.13
CLCN6-205ENST00000376492 CCSER1Q9C0I3 900 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms