RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 HAS1Q92839 578 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 TMA16Q96EY4 203 aaKnown RBP6.87□□□□□ -1.31
SMC1A-202ENST00000375340 CNBD2Q96M20 576 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 FSBPO95073 299 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 RARAP10276 462 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 CHKAP35790 457 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 PHKA2P46019 1235 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 CYTH1Q15438 398 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 WDR72Q3MJ13 1102 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 CRAMP1Q96RY5 1269 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 FUT2Q10981 343 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 OLFML2BQ68BL8 750 aa6.87□□□□□ -1.31
SMC1A-202ENST00000375340 ZBBXA8MT70 800 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CSPG5O95196 566 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 S100BP04271 92 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 DSG1Q02413 1049 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 PPATQ06203 517 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 TMEM259Q4ZIN3 620 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 USP33Q8TEY7 942 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 AGO4Q9HCK5 861 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 GPATCH2LQ9NWQ4 482 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 THEGQ9P2T0 379 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 HEY2Q9UBP5 337 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 DCDC2CA8MYV0 355 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 B2RBV5 119 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CST8O60676 142 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 BTKQ06187 659 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CYP24A1Q07973 514 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 DALRD3Q5D0E6 543 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 LRRC8EQ6NSJ5 796 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 IRF2BP1Q8IU81 584 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 TAS1R2Q8TE23 839 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 MMP19Q99542 508 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 KIF13AQ9H1H9 1805 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 KCPQ6ZWJ8 1503 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 DNAJC8O75937 253 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RRM1P23921 792 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 TAP1Q03518 808 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RC3H1Q5TC82 1133 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 PCNX4Q63HM2 1172 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NAIF1Q69YI7 327 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RTKN2Q8IZC4 609 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 MKNK1Q9BUB5 465 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 GCOM2Q9BZD3 368 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 TSPYL2Q9H2G4 693 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 ACAD9Q9H845 621 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NAALADL1Q9UQQ1 740 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CCDC22O60826 627 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NPTX2P47972 431 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NLRP9Q7RTR0 991 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 FSD1LQ9BXM9 530 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RXFP1Q9HBX9 757 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SUGT1Q9Y2Z0 365 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CICQ96RK0 1608 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NFIBO00712 420 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 PIGHQ14442 188 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 IL31Q6EBC2 164 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 MYLK4Q86YV6 388 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 TRIML2Q8N7C3 387 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 GMCL1P1Q8NEA9 526 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 PAFAH2Q99487 392 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RANBP17Q9H2T7 1088 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NINJ2Q9NZG7 142 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 LRRC10BA6NIK2 292 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 GNGT2O14610 69 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RPS6KA5O75582 802 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 EPHB2P29323 1055 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RPA3P35244 121 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 RFC1P35251 1148 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 OCRLQ01968 901 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 STX3Q13277 289 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 STRIP1Q5VSL9 837 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 NAV1Q8NEY1 1877 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SPATA20Q8TB22 786 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CPB2Q96IY4 423 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SH3GL3Q99963 347 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 MMTAG2Q9BU76 263 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 YY1AP1Q9H869 796 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SALL4Q9UJQ4 1053 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SPDYE16A6NNV3 312 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 AIM2O14862 343 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 SPDYE2Q495Y8 402 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 ERVK-5Q9HDB9 667 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 HERC5Q9UII4 1024 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 MTO1Q9Y2Z2 717 aaKnown RBP6.86□□□□□ -1.31
SMC1A-202ENST00000375340 IGSF9BQ9UPX0 1349 aa6.86□□□□□ -1.31
SMC1A-202ENST00000375340 CBX6O95503 412 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 PYGBP11216 843 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 FASTKD1Q53R41 847 aaKnown RBP6.85□□□□□ -1.31
SMC1A-202ENST00000375340 KLC3Q6P597 504 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 KAT5Q92993 513 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 WWP1Q9H0M0 922 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 NEUROG2Q9H2A3 272 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 HACD3Q9P035 362 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 TRIM49D1C9J1S8 452 aa6.85□□□□□ -1.31
SMC1A-202ENST00000375340 SLITRK3O94933 977 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms