RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 AKAP10O43572 662 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 CDH2P19022 906 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 PTK2BQ14289 1009 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIP10Q15642 601 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 SLC35G2Q8TBE7 412 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 ZIM3Q96PE6 472 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MMTAG2Q9BU76 263 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MRPL1Q9BYD6 325 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 FOXP3Q9BZS1 431 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MTO1Q9Y2Z2 717 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 ZSCAN9O15535 394 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 PJA2O43164 708 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 SLC37A4O43826 429 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 KLHL2O95198 593 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MUTP22033 750 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 TOB1P50616 345 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 BTNL9Q6UXG8 535 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 RNF149Q8NC42 400 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 UNC45AQ9H3U1 944 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MAGEB2O15479 319 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 WDR47O94967 919 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 BMP6P22004 513 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 S100A5P33763 92 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 FXR1P51114 621 aaKnown RBP eCLIP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 MAP3K7CLP57077 242 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 SNRPFP62306 86 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 CDR2LQ86X02 465 aaPredicted RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 C4orf33Q8N1A6 199 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 STX19Q8N4C7 294 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 SCFD2Q8WU76 684 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 CASS4Q9NQ75 786 aa12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 COL14A1Q05707 1796 aaKnown RBP12.86□□□□□ -0.35
NPLOC4-202ENST00000374747 ENO3P13929 434 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 SERPINB9P50453 376 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 SMAD1Q15797 465 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 CRY2Q49AN0 593 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 OR2W6PQ8NHA6 318 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 ATXN7L3BQ96GX2 97 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 GCNAQ96QF7 691 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 THTPAQ9BU02 230 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 DDX4Q9NQI0 724 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 DISP2A7MBM2 1401 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 FANCGO15287 622 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 CYP26A1O43174 497 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 RECQLP46063 649 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 GALCP54803 685 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 PTGISQ16647 500 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 DUOXA2Q1HG44 320 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 OLFML2BQ68BL8 750 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 PID1Q7Z2X4 250 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 TC2NQ8N9U0 490 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 ZFYVE28Q9HCC9 887 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 MRGBPQ9NV56 204 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 UBA6A0AVT1 1052 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 TMEM120BA0PK00 339 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 PRKCBP05771 671 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 PRKCEQ02156 737 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 NBPF12Q5TAG4 269 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 HNRNPLLQ8WVV9 542 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 FAM217BQ9NTX9 383 aaPredicted RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 EP400Q96L91 3159 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 RAD51CO43502 376 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 TMED10P49755 219 aaKnown RBP12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 DMC1Q14565 340 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 RAD9BQ6WBX8 426 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 KIF2BQ8N4N8 673 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 C9orf72Q96LT7 481 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 SP110Q9HB58 689 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 AIPL1Q9NZN9 384 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 SYNPO2Q9UMS6 1093 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 PCDHGB4Q9UN71 923 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 NEU2Q9Y3R4 380 aa12.85□□□□□ -0.35
NPLOC4-202ENST00000374747 ADCY3O60266 1144 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 HNRNPH1P31943 449 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 EMC2Q15006 297 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 EPAS1Q99814 870 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 TRIM54Q9BYV2 358 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 KDM4CQ9H3R0 1056 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 IGF2BP3O00425 579 aaKnown RBP eCLIP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 WNT10BO00744 389 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 ATP9BO43861 1147 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 SERPINI2O75830 405 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 ATXN8OSP0DMR3 200 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 GTF2A2P52657 109 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 TSPY1Q01534 308 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 RRM2BQ7LG56 351 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 JAMLQ86YT9 394 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 KIAA1683Q9H0B3 1180 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 APEX2Q9UBZ4 518 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 AP3B1O00203 1094 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 NEMP1O14524 444 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 KCNN4O15554 427 aa12.84□□□□□ -0.35
NPLOC4-202ENST00000374747 EFCAB14O75071 495 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms