RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ADGRF2Q8IZF7 708 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 KBTBD7Q8WVZ9 684 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 ELMO3Q96BJ8 720 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 BCO2Q9BYV7 579 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 NIF3L1Q9GZT8 377 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 TAB2Q9NYJ8 693 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 FBXL5Q9UKA1 691 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 SZT2Q5T011 3432 aa16.09■□□□□ 0.17
HSPG2-201ENST00000374673 TRANK1O15050 2925 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 OR6C75A6NL08 312 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 TPM2P07951 284 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 ATP1A3P13637 1013 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 KLRC2P26717 231 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 NRIP1P48552 1158 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 LHX1P48742 406 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 COPB1P53618 953 aaKnown RBP16.08■□□□□ 0.16
HSPG2-201ENST00000374673 TPM4P67936 248 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 HYAL1Q12794 435 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 RAB33AQ14088 237 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 RSPO2Q6UXX9 243 aaPredicted RBP16.08■□□□□ 0.16
HSPG2-201ENST00000374673 GBP6Q6ZN66 633 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
HSPG2-201ENST00000374673 RBM23Q86U06 439 aaKnown RBP16.08■□□□□ 0.16
HSPG2-201ENST00000374673 PPFIBP1Q86W92 1011 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 OSTM1Q86WC4 334 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 THEM5Q8N1Q8 247 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 EHBP1Q8NDI1 1231 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 RTP3Q9BQQ7 232 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 VPS16Q9H269 839 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 GCNT4Q9P109 453 aa16.08■□□□□ 0.16
HSPG2-201ENST00000374673 GOLGA6L19H0YKK7 550 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 PER2O15055 1255 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 ADAM12O43184 909 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 NCK2O43639 380 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 OR1D2P34982 312 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 CLCN4P51793 760 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 ROR1Q01973 937 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 KCNC3Q14003 757 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 COL19A1Q14993 1142 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 EXOC3L4Q17RC7 722 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 SCARA5Q6ZMJ2 495 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 GLYCTKQ8IVS8 523 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 EFHBQ8N7U6 833 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 OR10T2Q8NGX3 314 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 SLC22A17Q8WUG5 538 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 TATDN2Q93075 761 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 NT5C1BQ96P26 610 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 ACBD6Q9BR61 282 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 MRPL45Q9BRJ2 306 aaKnown RBP16.07■□□□□ 0.16
HSPG2-201ENST00000374673 INTS2Q9H0H0 1204 aaKnown RBP16.07■□□□□ 0.16
HSPG2-201ENST00000374673 SDCBP2Q9H190 292 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 FAM124BQ9H5Z6 455 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-201ENST00000374673 SMYD3Q9H7B4 428 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 CYP3A43Q9HB55 503 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.07■□□□□ 0.16
HSPG2-201ENST00000374673 DDX43Q9NXZ2 648 aaKnown RBP16.07■□□□□ 0.16
HSPG2-201ENST00000374673 STXBP5LQ9Y2K9 1186 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 HCFC2Q9Y5Z7 792 aa16.07■□□□□ 0.16
HSPG2-201ENST00000374673 WDR27A2RRH5 827 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 GLUD1P00367 558 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 PCSK1P29120 753 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 GTF2F1P35269 517 aaKnown RBP eCLIP16.06■□□□□ 0.162e-10■■■■■ 42.2
HSPG2-201ENST00000374673 RAP1GAPP47736 663 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 CDH8P55286 799 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 LILRA6Q6PI73 481 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 TRIM65Q6PJ69 517 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 ZCWPW1Q9H0M4 648 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 NME7Q9Y5B8 376 aa16.06■□□□□ 0.16
HSPG2-201ENST00000374673 LGALS16A8MUM7 142 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 PES1O00541 588 aaKnown RBP16.05■□□□□ 0.16
HSPG2-201ENST00000374673 TGM5O43548 720 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 ABLIM3O94929 683 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 CPB1P15086 417 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 SLC9A1P19634 815 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 TBXAS1P24557 533 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-201ENST00000374673 PON1P27169 355 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 GNL1P36915 607 aaPredicted RBP16.05■□□□□ 0.16
HSPG2-201ENST00000374673 INCA1Q0VD86 236 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 KCNMA1Q12791 1236 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 LRMPQ12912 555 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 GPR17Q13304 367 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 ADAM15Q13444 863 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 CUL2Q13617 745 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 CTC1Q2NKJ3 1217 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 INTS6LQ5JSJ4 861 aaKnown RBP16.05■□□□□ 0.16
HSPG2-201ENST00000374673 TPGS2Q68CL5 300 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 TMEM184AQ6ZMB5 413 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 OR6B3Q8NGW1 331 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 ZNF461Q8TAF7 563 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 TMEM209Q96SK2 561 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 CRACR2AQ9BSW2 395 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 ANP32EQ9BTT0 268 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 SNX25Q9H3E2 840 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 IGFLR1Q9H665 355 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 FBXW11Q9UKB1 542 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 CDH9Q9ULB4 789 aa16.05■□□□□ 0.16
HSPG2-201ENST00000374673 PTPRDP23468 1912 aa16.04■□□□□ 0.16
HSPG2-201ENST00000374673 A8MXQ7 604 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms