RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 TMEM199Q8N511 208 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 TOP6BLQ8N6T0 577 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 LNX1Q8TBB1 728 aaPredicted RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 DDX1Q92499 740 aaKnown RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 TMEM176AQ96HP8 235 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 MRPL9Q9BYD2 267 aaKnown RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 GOLGA2P5Q9HBQ8 144 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 PRDM5Q9NQX1 630 aaPredicted RBP10.34□□□□□ -0.75
PTPN20-202ENST00000374339 NENFQ9UMX5 172 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 CEP83Q9Y592 693 aa10.34□□□□□ -0.75
PTPN20-202ENST00000374339 MICAL3Q7RTP6 2002 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ABHD14A-ACY1A0A1B0GW23 586 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ANKRD62A6NC57 917 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 BTNL10A8MVZ5 291 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 PPEF2O14830 753 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 TMEM253P0C7T8 217 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CHRNB2P17787 502 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ARHGAP25P42331 645 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 RAP1GAPP47736 663 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CLCNKBP51801 687 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 RAD23BP54727 409 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CDH8P55286 799 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ETF1P62495 437 aaKnown RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 STILQ15468 1287 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 UPP1Q16831 310 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CLEC16AQ2KHT3 1053 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 SOWAHAQ2M3V2 549 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CLLU1OSQ5K130 101 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 MFSD5Q6N075 450 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 LIMS2Q7Z4I7 341 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 UBE2Q1Q7Z7E8 422 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 RNF10Q8N5U6 811 aaKnown RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 OLIG1Q8TAK6 271 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 SPATA18Q8TC71 538 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ZNF606Q8WXB4 792 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CTNNBL1Q8WYA6 563 aaPredicted RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 TRIM11Q96F44 468 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 CALR3Q96L12 384 aaKnown RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ZNF518BQ9C0D4 1074 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 SDCBP2Q9H190 292 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 ISCUQ9H1K1 167 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 SNX25Q9H3E2 840 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 OCEL1Q9H607 264 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 RNF19AQ9NV58 838 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 MIOSQ9NXC5 875 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 PRKAG2Q9UGJ0 569 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 PUF60Q9UHX1 559 aaKnown RBP10.33□□□□□ -0.76
PTPN20-202ENST00000374339 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 PCDHGC3Q9UN70 934 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 LTBP2Q14767 1821 aa10.33□□□□□ -0.76
PTPN20-202ENST00000374339 TTC3P53804 2025 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 A0A0A6YYK5 440 aaPredicted RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 CASTOR2A6NHX0 329 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 CYB561D2O14569 222 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 FTLP02792 175 aaPredicted RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 FGFR1P11362 822 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 VDRP11473 427 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 ODC1P11926 461 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 TNNT1P13805 278 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 CD19P15391 556 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 NSFP46459 744 aaKnown RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 AFF1P51825 1210 aaKnown RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 NDST1P52848 882 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 DSC1Q08554 894 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 ZNF394Q53GI3 561 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 SGO2Q562F6 1265 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 DCLRE1AQ6PJP8 1040 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 ADGRF2Q8IZF7 708 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 TMEM130Q8N3G9 435 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 SLC4A11Q8NBS3 891 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 KIF18AQ8NI77 898 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 TNIP3Q96KP6 325 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 HEXIM2Q96MH2 286 aaKnown RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 NOX5Q96PH1 765 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 ALS2CR12Q96Q35 445 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 ACP6Q9NPH0 428 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 RRAGDQ9NQL2 400 aaPredicted RBP10.32□□□□□ -0.76
PTPN20-202ENST00000374339 TBC1D13Q9NVG8 400 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 DSEQ9UL01 958 aa10.32□□□□□ -0.76
PTPN20-202ENST00000374339 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-202ENST00000374339 TRIM43BA6NCK2 446 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 RCCD1A6NED2 376 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 A8MXQ7 604 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 TMCO5BA8MYB1 307 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 TMEM189-UBE2V1I3L0A0 370 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 SPTLC1O15269 473 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 TRAPPC3O43617 180 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 B3GAT3O94766 335 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 BAIAP3O94812 1187 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 CYP1A1P04798 512 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-202ENST00000374339 MYBL1P10243 752 aa10.31□□□□□ -0.76
PTPN20-202ENST00000374339 EN2P19622 333 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-202ENST00000374339 WARSP23381 471 aaKnown RBP10.31□□□□□ -0.76
PTPN20-202ENST00000374339 GNL1P36915 607 aaPredicted RBP10.31□□□□□ -0.76
PTPN20-202ENST00000374339 LHX1P48742 406 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms