RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 ASZ1Q8WWH4 475 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 ENTPD7Q9NQZ7 604 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 PNPLA6Q8IY17 1366 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 TGFB2P61812 414 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 SNRNP35Q16560 246 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 SNX31Q8N9S9 440 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 WWP1Q9H0M0 922 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 ABI2Q9NYB9 513 aaPredicted RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 SH3BP1Q9Y3L3 701 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 HORMAD1Q86X24 394 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 CATSPER1Q8NEC5 780 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 IL17RAQ96F46 866 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 CPB2Q96IY4 423 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 C20orf96Q9NUD7 363 aaPredicted RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 ZFATQ9P243 1243 aa14.98□□□□□ -0.01
TRAF1-201ENST00000373887 LSM7Q9UK45 103 aaKnown RBP14.98□□□□□ -0.01
TRAF1-201ENST00000373887 CFAP73A6NFT4 308 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 SUPT3HB4E1H0 165 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ATP1A1P05023 1023 aaKnown RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ZNF286BP0CG31 522 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 SPATA21Q7Z572 469 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 FLCNQ8NFG4 579 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 CEP170BQ9Y4F5 1589 aaPredicted RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 CCDC81Q6ZN84 652 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 HDDC2Q7Z4H3 204 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 TRIM69Q86WT6 500 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 RHOT1Q8IXI2 618 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 WNT8AQ9H1J5 351 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 TRABDQ9H4I3 376 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 KCNQ5Q9NR82 932 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 USP27XA6NNY8 438 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 AKT1P31749 480 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ALDH7A1P49419 539 aaKnown RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ADAMTS13Q76LX8 1427 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ENO4A6NNW6 628 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 SRP72O76094 671 aaKnown RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ARL4DP49703 201 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 PLOD1Q02809 727 aaPredicted RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 GTF2H3Q13889 308 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 KYAT1Q16773 422 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 EME1Q96AY2 570 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 TAF6LQ9Y6J9 622 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ETFBP38117 255 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 SLC16A1P53985 500 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 RAD51Q06609 339 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
TRAF1-201ENST00000373887 PARVAQ9NVD7 372 aa14.97□□□□□ -0.01
TRAF1-201ENST00000373887 ANTXR2P58335 489 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 PCSK7Q16549 785 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 SGO1Q5FBB7 561 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 TMEM154Q6P9G4 183 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 NUDT18Q6ZVK8 323 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 PIK3R5Q8WYR1 880 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 AMACRQ9UHK6 382 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 UBXN8O00124 270 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 SRGNP10124 158 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 LONRF1Q17RB8 773 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 C3orf67Q6ZVT6 689 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 DMAP1Q9NPF5 467 aaPredicted RBP14.96□□□□□ -0.01
TRAF1-201ENST00000373887 LCMT1Q9UIC8 334 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 TARSL2A2RTX5 802 aaKnown RBP14.96□□□□□ -0.01
TRAF1-201ENST00000373887 GRID2IPA4D2P6 1211 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 NFIBO00712 420 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 AIM2O14862 343 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 MAGEB2O15479 319 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 UBTFL6P0CB48 400 aaPredicted RBP14.96□□□□□ -0.01
TRAF1-201ENST00000373887 KCNA3P22001 575 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 ORC2Q13416 577 aaPredicted RBP14.96□□□□□ -0.01
TRAF1-201ENST00000373887 LAMC2Q13753 1193 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 PABPC5Q96DU9 382 aaKnown RBP14.96□□□□□ -0.01
TRAF1-201ENST00000373887 MS4A14Q96JA4 679 aa14.96□□□□□ -0.01
TRAF1-201ENST00000373887 A0A1B0GW55 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DDTLA6NHG4 134 aaPredicted RBP14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L2P0CJ85 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L3P0CJ86 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L4P0CJ87 422 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L5P0CJ88 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L6P0CJ89 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4L7P0CJ90 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DNAJB2P25686 324 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 ACTR2P61160 394 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 EPC2Q52LR7 807 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 BBS2Q9BXC9 721 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 RAD18Q9NS91 495 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DUX4Q9UBX2 424 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 DOLKQ9UPQ8 538 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 PDHXO00330 501 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 ABCE1P61221 599 aaKnown RBP14.96□□□□□ -0.02
TRAF1-201ENST00000373887 RUNX1T1Q06455 604 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 STAMBPL1Q96FJ0 436 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 AGPAT1Q99943 283 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 TRIM8Q9BZR9 551 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 PCMTD2Q9NV79 361 aa14.96□□□□□ -0.02
TRAF1-201ENST00000373887 ALDH1A3P47895 512 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 MRPL1Q9BYD6 325 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 DBR1Q9UK59 544 aaKnown RBP14.95□□□□□ -0.02
TRAF1-201ENST00000373887 PKP3Q9Y446 797 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 MYMKA6NI61 221 aa14.95□□□□□ -0.02
TRAF1-201ENST00000373887 ZNF185O15231 689 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms