RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 CXCL16Q9H2A7 254 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 ZFYVE28Q9HCC9 887 aa20.8■□□□□ 0.92
HDAC1-201ENST00000373548 FAM187AA6NFU0 413 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 CILPO75339 1184 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 DARSP14868 501 aaKnown RBP20.79■□□□□ 0.92
HDAC1-201ENST00000373548 PTGIRP43119 386 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 INHBEP58166 350 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 TAS2R40P59535 323 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 ORC1Q13415 861 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 ALS2CLQ60I27 953 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 SLC27A1Q6PCB7 646 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 JAMLQ86YT9 394 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 CD302Q8IX05 232 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 SLC4A11Q8NBS3 891 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.79■□□□□ 0.92
HDAC1-201ENST00000373548 DNAJB3Q8WWF6 145 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 KIF12Q96FN5 646 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 PLVAPQ9BX97 442 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 EIF2AQ9BY44 585 aaKnown RBP20.79■□□□□ 0.92
HDAC1-201ENST00000373548 AP5M1Q9H0R1 490 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 RAB17Q9H0T7 212 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 DPH5Q9H2P9 285 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 CYP3A43Q9HB55 503 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 PCYOX1Q9UHG3 505 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 MTUS1Q9ULD2 1270 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 Q9Y3F1 56 aa20.79■□□□□ 0.92
HDAC1-201ENST00000373548 TMEM191CA6NGB0 347 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 O00370 1275 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 TNPO2O14787 897 aaKnown RBP20.78■□□□□ 0.92
HDAC1-201ENST00000373548 FSCN2O14926 492 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 RNF40O75150 1001 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 CRHR2Q13324 411 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 ELOVL4Q9GZR5 314 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 FAM114A2Q9NRY5 505 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 SNTG2Q9NY99 539 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.78■□□□□ 0.92
HDAC1-201ENST00000373548 CEP83Q9Y592 693 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 FAM155AB1AL88 458 aaPredicted RBP20.78■□□□□ 0.92
HDAC1-201ENST00000373548 TREHO43280 583 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 CTGFP29279 349 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 MAN1A1P33908 653 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 RBP5P82980 135 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 ZNF200P98182 395 aaPredicted RBP20.78■□□□□ 0.92
HDAC1-201ENST00000373548 LLGL1Q15334 1064 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 DUPD1Q68J44 220 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 ERICH1Q86X53 443 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 ERP44Q9BS26 406 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 LHX5Q9H2C1 402 aa20.78■□□□□ 0.92
HDAC1-201ENST00000373548 SCN1AP35498 2009 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 MED7O43513 233 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 PSTPIP1O43586 416 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 HSF2BPO75031 334 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 STAU1O95793 577 aaKnown RBP20.77■□□□□ 0.92
HDAC1-201ENST00000373548 P4HA1P13674 534 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 HSPA9P38646 679 aaKnown RBP20.77■□□□□ 0.92
HDAC1-201ENST00000373548 DNAJC24Q6P3W2 148 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 NOTUMQ6P988 496 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 CCDC137Q6PK04 289 aaKnown RBP20.77■□□□□ 0.92
HDAC1-201ENST00000373548 APBB1IPQ7Z5R6 666 aaPredicted RBP20.77■□□□□ 0.92
HDAC1-201ENST00000373548 RHOT1Q8IXI2 618 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 TRIM31Q9BZY9 425 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 PLEKHA5Q9HAU0 1116 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 IP6K2Q9UHH9 426 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 CYTH4Q9UIA0 394 aa20.77■□□□□ 0.92
HDAC1-201ENST00000373548 PTPN11Q06124 597 aaPredicted RBP20.77■□□□□ 0.91
HDAC1-201ENST00000373548 ZNF252P-AS1Q0IIN9 211 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 PPP1R15BQ5SWA1 713 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 CYP4A22Q5TCH4 519 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 IQCKQ8N0W5 287 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 C12orf50Q8NA57 414 aaPredicted RBP20.77■□□□□ 0.91
HDAC1-201ENST00000373548 TMEM40Q8WWA1 233 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 SNX27Q96L92 541 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 ZMAT2Q96NC0 199 aaKnown RBP20.77■□□□□ 0.91
HDAC1-201ENST00000373548 ZIM3Q96PE6 472 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 MCEEQ96PE7 176 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 HERPUD2Q9BSE4 406 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 ADAM21Q9UKJ8 722 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 USTQ9Y2C2 406 aa20.77■□□□□ 0.91
HDAC1-201ENST00000373548 COILP38432 576 aaPredicted RBP20.76■□□□□ 0.91
HDAC1-201ENST00000373548 PCBP1Q15365 356 aaKnown RBP eCLIP20.76■□□□□ 0.91
HDAC1-201ENST00000373548 FSCN1Q16658 493 aaKnown RBP20.76■□□□□ 0.91
HDAC1-201ENST00000373548 PTPN20Q4JDL3 420 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 PIK3R5Q8WYR1 880 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 TMEM176AQ96HP8 235 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 SH3GL2Q99962 352 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 HES2Q9Y543 173 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 PDCD11Q14690 1871 aaKnown RBP20.76■□□□□ 0.91
HDAC1-201ENST00000373548 PASKQ96RG2 1323 aa20.76■□□□□ 0.91
HDAC1-201ENST00000373548 OGDHQ02218 1023 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 SNX17Q15036 470 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 CFAP58Q5T655 872 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 C3orf20Q8ND61 904 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 RASAL2Q9UJF2 1139 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 DERAQ9Y315 318 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 FLT3P36888 993 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 INCA1Q0VD86 236 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 KATNAL2Q8IYT4 538 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 TRPV1Q8NER1 839 aa20.75■□□□□ 0.91
HDAC1-201ENST00000373548 NXF3Q9H4D5 531 aaKnown RBP20.75■□□□□ 0.91
HDAC1-201ENST00000373548 LRRC19Q9H756 370 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms