RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 FAM25AB3EWG3 89 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FAM25CB3EWG5 89 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FAM25GB3EWG6 89 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CDC27P30260 824 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CCR4P51679 360 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 PPP2R2AP63151 447 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 TIGD7Q6NT04 549 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 EPHX4Q8IUS5 362 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 A2MP01023 1474 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ZNF318Q5VUA4 2279 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 MRPS35P82673 323 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 B3GALNT2Q8NCR0 500 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 BLOC1S5Q8TDH9 187 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 GLMNQ92990 594 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 STAMBPL1Q96FJ0 436 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 THUMPD3Q9BV44 507 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 PIF1Q9H611 641 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 JPH1Q9HDC5 661 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 LRRC14BA6NHZ5 514 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L15C9J2P7 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L13C9JLJ4 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L11C9JVI0 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L18D6R9N7 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L22D6RA61 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L17D6RBQ6 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L19D6RCP7 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L20D6RJB6 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 PCCAP05165 728 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L24Q0WX57 530 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 SMTNL2Q2TAL5 461 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FOXR1Q6PIV2 292 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CCDC137Q6PK04 289 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP17L6PQ6QN14 398 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 TMEM143Q96AN5 459 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 MRPL48Q96GC5 212 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 IARS2Q9NSE4 1012 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 UVRAGQ9P2Y5 699 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 KCNH2Q12809 1159 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 NFRKBQ6P4R8 1299 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ANAPC2Q9UJX6 822 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ESYT3A0FGR9 886 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 POLRMTO00411 1230 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 PCDH8O95206 1070 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 LXNQ9BS40 222 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 SHCBP1LQ9BZQ2 653 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FBXO40Q9UH90 709 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 IPPQ9Y573 584 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 USP1O94782 785 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CACUL1Q86Y37 369 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 PANX2Q96RD6 677 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ERAP1Q9NZ08 941 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CYP27B1O15528 508 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 HLA-DQA2P01906 255 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 COASYQ13057 564 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 DENND6AQ8IWF6 608 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 MYO3BQ8WXR4 1341 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 GOLGA8TH3BQL2 631 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 KRT33AO76009 404 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 MMP1P03956 469 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CASP1P29466 404 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 GRK3P35626 688 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 STX3Q13277 289 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 TMEM132BQ14DG7 1078 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ZSCAN18Q8TBC5 510 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 GFM2Q969S9 779 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 EAF2Q96CJ1 260 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FAR2Q96K12 515 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FAM49BQ9NUQ9 324 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ZMYND8Q9ULU4 1186 aaPredicted RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CHMP2BQ9UQN3 213 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 TRIM49BA6NDI0 452 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ATP8B1O43520 1251 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ENDOD1O94919 500 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 FGFR1P11362 822 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 RGS2P41220 211 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CARNMT1Q8N4J0 409 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 SLC30A5Q8TAD4 765 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 MCEEQ96PE7 176 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 CATSPERBQ9H7T0 1116 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 KLHL1Q9NR64 748 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 DIS3Q9Y2L1 958 aaKnown RBP9.43□□□□□ -0.9
PTPRT-206ENST00000373198 TRADDQ15628 312 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 ZSWIM7Q19AV6 140 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 DCAF6Q58WW2 860 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 WNT8AQ9H1J5 351 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 RAB6BQ9NRW1 208 aa9.43□□□□□ -0.9
PTPRT-206ENST00000373198 IRX1P78414 480 aaPredicted RBP9.42□□□□□ -0.9
PTPRT-206ENST00000373198 KLC1Q07866 573 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 RNF44Q7L0R7 432 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 KAT2BQ92831 832 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 AIFM3Q96NN9 605 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ROGDIQ9GZN7 287 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CPVLQ9H3G5 476 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 SNX9Q9Y5X1 595 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 ALBP02768 609 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 CCNIQ14094 377 aa9.42□□□□□ -0.9
PTPRT-206ENST00000373198 DGKKQ5KSL6 1271 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms