RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 ADGRF4Q8IZF3 695 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 PPFIBP2Q8ND30 876 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 MYO19Q96H55 970 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 ZDHHC15Q96MV8 337 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 SELENOSQ9BQE4 189 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 SLC39A3Q9BRY0 314 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 MRIQ9BWK5 157 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 FAM126AQ9BYI3 521 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 TRIM9Q9C026 710 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 VPS16Q9H269 839 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 DENND2DQ9H6A0 471 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 NHEJ1Q9H9Q4 299 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 DBNDD1Q9H9R9 158 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 SIRPGQ9P1W8 387 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 MAGEC2Q9UBF1 373 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 FOXD3Q9UJU5 478 aaPredicted RBP9.35□□□□□ -0.91
ATG4A-203ENST00000372232 QSER1Q2KHR3 1735 aa9.35□□□□□ -0.91
ATG4A-203ENST00000372232 TRIM49BA6NDI0 452 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 FBP2O00757 339 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PPP1R11O60927 126 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 MOCS3O95396 460 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 GTF2H1P32780 548 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TNNC1P63316 161 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 SLC34A1Q06495 639 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 MSLNQ13421 630 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 GPATCH4Q5T3I0 446 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 GJC2Q5T442 439 aaPredicted RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 SYCP2LQ5T4T6 812 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TTBK2Q6IQ55 1244 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CCDC174Q6PII3 467 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TMC3Q7Z5M5 1100 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 C11orf74Q86VG3 221 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 ZFPM1Q8IX07 1006 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PGBD3Q8N328 593 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PPP1R14CQ8TAE6 165 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 DGCR14Q96DF8 476 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 MS4A14Q96JA4 679 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 DNAJC1Q96KC8 554 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CCDC17Q96LX7 622 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 HGH1Q9BTY7 390 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CENPOQ9BU64 300 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 C1QTNF2Q9BXJ5 285 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TLE6Q9H808 572 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 MLXIPQ9HAP2 919 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CLK4Q9HAZ1 481 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TAB2Q9NYJ8 693 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 LRWD1Q9UFC0 647 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TDRKHQ9Y2W6 561 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 GOLGB1Q14789 3259 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 IQCA1LA6NCM1 817 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PSMA7O14818 248 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 ENTPD5O75356 428 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 KCNA2P16389 499 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CALCRLQ16602 461 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TKFCQ3LXA3 575 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 STRIP1Q5VSL9 837 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PATL1Q86TB9 770 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 NELFCDQ8IXH7 590 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 FAM186BQ8IYM0 893 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 FAM133AQ8N9E0 248 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 NMD3Q96D46 503 aaKnown RBP9.34□□□□□ -0.91
ATG4A-203ENST00000372232 ANAPC16Q96DE5 110 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CCDC42Q96M95 316 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 PSMB7Q99436 277 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 CCDC68Q9H2F9 335 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 DNAJC18Q9H819 358 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TRPC7Q9HCX4 862 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 RIC8AQ9NPQ8 531 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 HOXC10Q9NYD6 342 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 TMEM59LQ9UK28 342 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 GIT1Q9Y2X7 761 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 NUMBLQ9Y6R0 609 aa9.34□□□□□ -0.91
ATG4A-203ENST00000372232 UMODL1Q5DID0 1318 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 TRAFD1O14545 582 aaPredicted RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 ZNF263O14978 683 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 ZBTB5O15062 677 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 NCK2O43639 380 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 SLC37A4O43826 429 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CPNE3O75131 537 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 TDP2O95551 362 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 EYA4O95677 639 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 EEF1GP26641 437 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 PSMA6P60900 246 aaKnown RBP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CNGA2Q16280 664 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CNGA3Q16281 694 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 TTI2Q6NXR4 508 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 NXPE4Q6UWF7 544 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 C2CD5Q86YS7 1000 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 PASD1Q8IV76 773 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CELF2-AS1Q8N7Q2 184 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.33□□□□□ -0.92
ATG4A-203ENST00000372232 MTMR8Q96EF0 704 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 CALML4Q96GE6 196 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 VPS50Q96JG6 964 aa9.33□□□□□ -0.92
ATG4A-203ENST00000372232 FRMD6Q96NE9 622 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms