RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 CDT1Q9H211 546 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 FAM49BQ9NUQ9 324 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 RBBP6Q7Z6E9 1792 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 F5H423 210 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 SHOX2O60902 331 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 PPFIA2O75334 1257 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 STAG3L1P0CL83 205 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 TBXAS1P24557 533 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 POLR2BP30876 1174 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 GJA5P36382 358 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 EFNA5P52803 228 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ATP11AP98196 1134 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 MXD4Q14582 209 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 RAB6CQ53S08 254 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 OTUD6BQ8N6M0 293 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 TMEM35BQ8NCS4 154 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 MPHOSPH6Q99547 160 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 RAB6CQ9H0N0 254 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 RASSF4Q9H2L5 321 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 EPB41L4BQ9H329 900 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 SPON1Q9HCB6 807 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 FEZ2Q9UHY8 353 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 LTBP3Q9NS15 1303 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 CYP1A1P04798 512 aaPredicted RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 NFX1Q12986 1120 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 SMAD1Q15797 465 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 SGSM1Q2NKQ1 1148 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 IZUMO3Q5VZ72 239 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 MPZL3Q6UWV2 235 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 ARFGAP2Q8N6H7 521 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
PDE6C-201ENST00000371447 DCLK3Q9C098 648 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 EPN3Q9H201 632 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 PCYOX1Q9UHG3 505 aa12.44□□□□□ -0.42
PDE6C-201ENST00000371447 M0QYV0 167 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 ZC3H11AO75152 810 aaKnown RBP eCLIP12.43□□□□□ -0.42
PDE6C-201ENST00000371447 GPS1Q13098 491 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 GPR162Q16538 588 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 SH3PXD2AQ5TCZ1 1133 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 HOOK3Q86VS8 718 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 ANKMY2Q8IV38 441 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 SMARCAD1Q9H4L7 1026 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 SETD4Q9NVD3 440 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 ADGRA2Q96PE1 1338 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 RIPK2O43353 540 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 HCRTO43612 131 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 CD48P09326 243 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 TGFB3P10600 412 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 HSPA6P17066 643 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 PPP2R5EQ16537 467 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 TCP11Q8WWU5 503 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 METTL5Q9NRN9 209 aaKnown RBP12.43□□□□□ -0.42
PDE6C-201ENST00000371447 KLK14Q9P0G3 267 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 PPP2R3BQ9Y5P8 575 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 PHIPQ8WWQ0 1821 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 MCM3APO60318 1980 aa12.43□□□□□ -0.42
PDE6C-201ENST00000371447 IGKV6D-21A0A0A0MT36 114 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 FSCN2O14926 492 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 HOXC6P09630 235 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 KRT3P12035 628 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ARSEP51690 589 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 HADHBP55084 474 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 LRIG3Q6UXM1 1119 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ZC3H18Q86VM9 953 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 WDR49Q8IV35 697 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SRRM1Q8IYB3 904 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 WDTC1Q8N5D0 677 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 C1orf127Q8N9H9 656 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 NETO2Q8NC67 525 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 FAM167AQ96KS9 214 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CPSF3Q9UKF6 684 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 GMNCA6NCL1 334 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 PDHXO00330 501 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 PMM2O15305 246 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 LGALS2P05162 132 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 EDNRBP24530 442 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CETN2P41208 172 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SKOR1P84550 965 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 GAD2Q05329 585 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 TFDP1Q14186 410 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 PTPN20Q4JDL3 420 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 FBXW10Q5XX13 1052 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CABS1Q96KC9 395 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 MIS12Q9H081 205 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SDCBP2Q9H190 292 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 VPS37BQ9H9H4 285 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SAYSD1Q9NPB0 183 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 INTS9Q9NV88 658 aaKnown RBP12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ERAP1Q9NZ08 941 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 STYXL1Q9Y6J8 313 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 SYNJ2BP-COX16A0A087WUM0 186 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ACKR2O00590 384 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 MMP8P22894 467 aa12.42□□□□□ -0.42
PDE6C-201ENST00000371447 ZNF252P-AS1Q0IIN9 211 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms