RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 TXNP10599 105 aaKnown RBP30.64■■■□□ 2.5
SSBP3-204ENST00000371320 TTLL12Q14166 644 aaPredicted RBP30.64■■■□□ 2.5
SSBP3-204ENST00000371320 ATP13A4Q4VNC1 1196 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 EFCAB12Q6NXP0 572 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 OTUD6BQ8N6M0 293 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 XYLT2Q9H1B5 865 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 KCNH4Q9UQ05 1017 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 CEP83Q9Y592 693 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 TCRBV5S1A1TA0A578 114 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 B4GALT4O60513 344 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 ASPAP45381 313 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 MFSD5Q6N075 450 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 TFAP2BQ92481 460 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 ADAM7Q9H2U9 754 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 PCDHGC3Q9UN70 934 aa30.64■■■□□ 2.5
SSBP3-204ENST00000371320 HBP1O60381 514 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 TCF4P15884 667 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 EIF4BP23588 611 aaKnown RBP30.63■■■□□ 2.49
SSBP3-204ENST00000371320 LIG3P49916 1009 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 CLCN3P51790 818 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 ZNF252P-AS1Q0IIN9 211 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 TNFAIP8L3Q5GJ75 292 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 EEF1DP3Q658K8 133 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 CDR2LQ86X02 465 aaPredicted RBP30.63■■■□□ 2.49
SSBP3-204ENST00000371320 ERICH1Q86X53 443 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 BBOF1Q8ND07 529 aa30.63■■■□□ 2.49
SSBP3-204ENST00000371320 KRT1P04264 644 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 YWHAEP62258 255 aaKnown RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 QPCTQ16769 361 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 LRRC38Q5VT99 294 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 KAZNQ674X7 775 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 GSTA5Q7RTV2 222 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 YTHDF3Q7Z739 585 aaKnown RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 WDTC1Q8N5D0 677 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 CEP120Q8N960 986 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 ZBTB10Q96DT7 871 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 SLITRK1Q96PX8 696 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 DNAJC17Q9NVM6 304 aaKnown RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 DDX20Q9UHI6 824 aaKnown RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 IVNS1ABPQ9Y6Y0 642 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 F8VP50 259 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 TTC4O95801 387 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 OSBPP22059 807 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 CDH5P33151 784 aaPredicted RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 TAP1Q03518 808 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 PPIL2Q13356 520 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 TMEM63BQ5T3F8 832 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 ARMC9Q7Z3E5 817 aa30.62■■■□□ 2.49
SSBP3-204ENST00000371320 NXF1Q9UBU9 619 aaKnown RBP30.62■■■□□ 2.49
SSBP3-204ENST00000371320 KRT10P13645 584 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 LMNB2Q03252 620 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 LONRF1Q17RB8 773 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 TAOK1Q7L7X3 1001 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 MICALL1Q8N3F8 863 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 C5orf60A6NFR6 353 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 ASAP2O43150 1006 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 ATF7P17544 494 aaPredicted RBP30.61■■■□□ 2.49
SSBP3-204ENST00000371320 LACTBP83111 547 aaPredicted RBP30.61■■■□□ 2.49
SSBP3-204ENST00000371320 OGDHQ02218 1023 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 MBTD1Q05BQ5 628 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 MFSD7Q6UXD7 560 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 CPLX4Q7Z7G2 160 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 CHMP6Q96FZ7 201 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 MROH8Q9H579 483 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 RPF1Q9H9Y2 349 aaKnown RBP30.61■■■□□ 2.49
SSBP3-204ENST00000371320 PDGFCQ9NRA1 345 aa30.61■■■□□ 2.49
SSBP3-204ENST00000371320 TJP3O95049 919 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 KRT19P08727 400 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 IFT88Q13099 833 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 PIGHQ14442 188 aaPredicted RBP30.6■■■□□ 2.49
SSBP3-204ENST00000371320 TTLL4Q14679 1199 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 KYNUQ16719 465 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 PPP1R15BQ5SWA1 713 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 CYP4A22Q5TCH4 519 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 IZUMO3Q5VZ72 239 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 CDT1Q9H211 546 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 MINDY3Q9H8M7 445 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 POLIQ9UNA4 740 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 TNFSF13BQ9Y275 285 aa30.6■■■□□ 2.49
SSBP3-204ENST00000371320 IL18RAPO95256 599 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 CXCL8P10145 99 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 MOGSQ13724 837 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 ATXN2LQ8WWM7 1075 aaKnown RBP30.59■■■□□ 2.49
SSBP3-204ENST00000371320 CDCA5Q96FF9 252 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 SERPINB12Q96P63 405 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 LIASO43766 372 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 KLRC2P26717 231 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 RNF187Q5TA31 235 aaPredicted RBP30.59■■■□□ 2.49
SSBP3-204ENST00000371320 SMYD5Q6GMV2 418 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 DENND1BQ6P3S1 775 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 FASTKD5Q7L8L6 764 aaKnown RBP30.59■■■□□ 2.49
SSBP3-204ENST00000371320 IPO4Q8TEX9 1081 aaKnown RBP30.59■■■□□ 2.49
SSBP3-204ENST00000371320 PWWP2AQ96N64 755 aa30.59■■■□□ 2.49
SSBP3-204ENST00000371320 INTS9Q9NV88 658 aaKnown RBP30.59■■■□□ 2.49
SSBP3-204ENST00000371320 CD19P15391 556 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 DRD4P21917 467 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 COPS2P61201 443 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 C6orf89Q6UWU4 347 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 SPOCD1Q6ZMY3 1216 aa30.58■■■□□ 2.49
SSBP3-204ENST00000371320 TMEM192Q8IY95 271 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms