RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 PNPLA4P41247 253 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TAF6P49848 677 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TCEAL1Q15170 157 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 LRRC8DQ7L1W4 858 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 PEX26Q7Z412 305 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 SLFN11Q7Z7L1 901 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TTC39CQ8N584 583 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 CEP112Q8N8E3 955 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 ZNF564Q8TBZ8 553 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 TRIM11Q96F44 468 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 FAM124BQ9H5Z6 455 aaPredicted RBP17.88■□□□□ 0.45
PHGDH-202ENST00000369409 PCDHGC3Q9UN70 934 aa17.88■□□□□ 0.45
PHGDH-202ENST00000369409 SCN5AQ14524 2016 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 A0A0U1RQF3 1178 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 SPTLC1O15269 473 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 MED7O43513 233 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 ZNF623O75123 536 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 MTA2O94776 668 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 LSM8O95777 96 aaKnown RBP17.87■□□□□ 0.45
PHGDH-202ENST00000369409 SCNN1GP51170 649 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 SV2CQ496J9 727 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 MMS22LQ6ZRQ5 1243 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 COG1Q8WTW3 980 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 SEZ6LQ9BYH1 1024 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 RSAD1Q9HA92 442 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 SLC38A7Q9NVC3 462 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 MIOSQ9NXC5 875 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 ADAM22Q9P0K1 906 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 CACNG4Q9UBN1 327 aa17.87■□□□□ 0.45
PHGDH-202ENST00000369409 KPNA7A9QM74 516 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 THP07101 528 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 MYBL1P10243 752 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 PRLRP16471 622 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 RRM1P23921 792 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 LRPAP1P30533 357 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 PPP1R2P3Q6NXS1 205 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 LLGL2Q6P1M3 1020 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 PHLDB2Q86SQ0 1253 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 NT5DC3Q86UY8 548 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 PHF13Q86YI8 300 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-202ENST00000369409 TMEM35BQ8NCS4 154 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 NT5C1AQ9BXI3 368 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 AVENQ9NQS1 362 aaPredicted RBP17.86■□□□□ 0.45
PHGDH-202ENST00000369409 UVRAGQ9P2Y5 699 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 CEP83Q9Y592 693 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 TMEM110-MUSTN1A8MSY1 372 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 DYNC1I1O14576 645 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 KIF4AO95239 1232 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 SELPP16109 830 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 RPS6KA1Q15418 735 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 SOWAHAQ2M3V2 549 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 C11orf63Q6NUN7 778 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 DENND1BQ6P3S1 775 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 CALR3Q96L12 384 aaKnown RBP17.86■□□□□ 0.45
PHGDH-202ENST00000369409 STXBP5LQ9Y2K9 1186 aa17.86■□□□□ 0.45
PHGDH-202ENST00000369409 TSC2P49815 1807 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 EFCAB8A8MWE9 144 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 PQBP1O60828 265 aaKnown RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 VDRP11473 427 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 CDH5P33151 784 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 C1QBPQ07021 282 aaKnown RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 CKAP4Q07065 602 aaKnown RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 PTP4A2Q12974 167 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 BFSP2Q13515 415 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 SGO2Q562F6 1265 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 LIN9Q5TKA1 542 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 DPH6Q7L8W6 267 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 ECHDC2Q86YB7 292 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 LINC01599Q8WXQ3 324 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 PGBD4Q96DM1 585 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 BTBD6Q96KE9 485 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 HEXIM2Q96MH2 286 aaKnown RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 TSPYL2Q9H2G4 693 aaPredicted RBP17.85■□□□□ 0.45
PHGDH-202ENST00000369409 ABCB6Q9NP58 842 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 GDAP2Q9NXN4 497 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 AMFRQ9UKV5 643 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 NME7Q9Y5B8 376 aa17.85■□□□□ 0.45
PHGDH-202ENST00000369409 CTAGE15A4D2H0 777 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 CTAGE8P0CG41 777 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 SKIP12755 728 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 MMP8P22894 467 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ATN1P54259 1190 aaPredicted RBP17.84■□□□□ 0.45
PHGDH-202ENST00000369409 LILRA4P59901 499 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 MESDQ14696 234 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ELF2Q15723 593 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ERCC6LQ2NKX8 1250 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 TEX35Q5T0J7 233 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 CTAGE6Q86UF2 777 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 CREG2Q8IUH2 290 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 CTAGE4Q8IX94 777 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 OR6B3Q8NGW1 331 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 KBTBD7Q8WVZ9 684 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 VCPIP1Q96JH7 1222 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 ZNF518BQ9C0D4 1074 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 RGS18Q9NS28 235 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 EHD2Q9NZN4 543 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 L1RE1Q9UN81 338 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.84■□□□□ 0.45
PHGDH-202ENST00000369409 INPP5FQ9Y2H2 1132 aa17.84■□□□□ 0.45
PHGDH-202ENST00000369409 TET1Q8NFU7 2136 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms