RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 CHST12Q9NRB3 414 aa15.02■□□□□ -0
HMGCS2-201ENST00000369406 CTTNBP2NLQ9P2B4 639 aa15.02■□□□□ -0
HMGCS2-201ENST00000369406 ARL5CA6NH57 179 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 KBTBD13C9JR72 458 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 DNM1LO00429 736 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 ITGA4P13612 1032 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 SCNN1GP51170 649 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 CCDC142Q17RM4 750 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 RSRC2Q7L4I2 434 aaKnown RBP15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 MRPL10Q7Z7H8 261 aaKnown RBP15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 DAAM2Q86T65 1068 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 C12orf29Q8N999 325 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 NOA1Q8NC60 698 aaKnown RBP15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 RNF169Q8NCN4 708 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 KBTBD7Q8WVZ9 684 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 BEGAINQ9BUH8 593 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 RNF208Q9H0X6 261 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 DPEP3Q9H4B8 488 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 CNOT8Q9UFF9 292 aaKnown RBP15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 GTF3C4Q9UKN8 822 aa15.02□□□□□ -0.01
HMGCS2-201ENST00000369406 CD19P15391 556 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 TNNC1P63316 161 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 TCEAL1Q15170 157 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 C3orf58Q8NDZ4 430 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 OGDHLQ9ULD0 1010 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 TMEM110-MUSTN1A8MSY1 372 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 B4GALT3O60512 393 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 KIF4AO95239 1232 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 ZSCAN20P17040 1043 aaPredicted RBP15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 MARCKSL1P49006 195 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 CDR1P51861 262 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 DAB2IPQ5VWQ8 1189 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 LRRC52Q8N7C0 313 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 CYP3A43Q9HB55 503 aa15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 BARX2Q9UMQ3 279 aaPredicted RBP15.01□□□□□ -0.01
HMGCS2-201ENST00000369406 MTA2O94776 668 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 CD4P01730 458 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 NSFP46459 744 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 HADHBP55084 474 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 WHAMMP3Q1A5X7 153 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 DCAF12L1Q5VU92 463 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 PHF13Q86YI8 300 aaPredicted RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 DNAJC5GQ8N7S2 189 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 MNS1Q8NEH6 495 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 ZNF564Q8TBZ8 553 aaPredicted RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 TMEM176AQ96HP8 235 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 TLR3O15455 904 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 DDX3YO15523 660 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 NBNO60934 754 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 LMO2P25791 158 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 ATN1P54259 1190 aaPredicted RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 MYO1EQ12965 1108 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 DPH6Q7L8W6 267 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 ZNF598Q86UK7 904 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 OSTM1Q86WC4 334 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 DIS3LQ8TF46 1054 aaKnown RBP15□□□□□ -0.01
HMGCS2-201ENST00000369406 PCDHGC3Q9UN70 934 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 L1RE1Q9UN81 338 aa15□□□□□ -0.01
HMGCS2-201ENST00000369406 A0A0U1RQF3 1178 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 F8W810 466 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 RPLP2P05387 115 aaKnown RBP14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 LRPAP1P30533 357 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 CLCNKBP51801 687 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 LILRA4P59901 499 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 CYP4A22Q5TCH4 519 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 LIMS2Q7Z4I7 341 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 ACOT1Q86TX2 421 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 RHOT2Q8IXI1 618 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 KRT35Q92764 455 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 HES6Q96HZ4 224 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 FAXDC2Q96IV6 333 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 TRAIPQ9BWF2 469 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 ADAM22Q9P0K1 906 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 ALG6Q9Y672 507 aa14.99□□□□□ -0.01
HMGCS2-201ENST00000369406 TCRBV5S1A1TA0A578 114 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 KPNA7A9QM74 516 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 O00370 1275 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 ZNF623O75123 536 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 MICAL2O94851 1124 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 POMCP01189 267 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PAEPP09466 180 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 MMP8P22894 467 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 CDH5P33151 784 aaPredicted RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 MESDQ14696 234 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 KCTD19Q17RG1 926 aaPredicted RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PTPN20Q4JDL3 420 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 TEX35Q5T0J7 233 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 TRIM72Q6ZMU5 477 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PEX26Q7Z412 305 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 ALG3Q92685 438 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 CASTOR2A6NHX0 329 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 TULP2O00295 520 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 DYNC1I1O14576 645 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PQBP1O60828 265 aaKnown RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PFKMP08237 780 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 PRLRP16471 622 aa14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 RNASE9P60153 205 aaKnown RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 YWHAEP62258 255 aaKnown RBP14.98□□□□□ -0.01
HMGCS2-201ENST00000369406 C2orf54Q08AI8 447 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms