RNA–Protein interactions for RNA: ENST00000369306.7

PEX11B-201, Transcript of peroxisomal biogenesis factor 11 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX11B, Length 1,740 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX11B-201ENST00000369306 TTC39CQ8N584 583 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 IFT81Q8WYA0 676 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 PLVAPQ9BX97 442 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 ARHGAP39Q9C0H5 1083 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 ELOVL4Q9GZR5 314 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 ERVK-5Q9HDB9 667 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 ST7Q9NRC1 585 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.31■□□□□ 0.2
PEX11B-201ENST00000369306 LCMT1Q9UIC8 334 aa16.31■□□□□ 0.2
PEX11B-201ENST00000369306 PCNTO95613 3336 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 CITO14578 2027 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 MYADML2A6NDP7 307 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TMEM191CA6NGB0 347 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 H3BQF6 201 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TLR3O15455 904 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 ALDH1A1P00352 501 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 CD19P15391 556 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 YARSP54577 528 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TRADDQ15628 312 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 DENND1BQ6P3S1 775 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 ADAT2Q7Z6V5 191 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 ZDHHC14Q8IZN3 488 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 PRELID2Q8N945 189 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TRIB2Q92519 343 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TMEM176AQ96HP8 235 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 ZMAT2Q96NC0 199 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TWNKQ96RR1 684 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 UPF3AQ9H1J1 476 aaKnown RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 CXCL16Q9H2A7 254 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 CNTN3Q9P232 1028 aa16.3■□□□□ 0.2
PEX11B-201ENST00000369306 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.3■□□□□ 0.2
PEX11B-201ENST00000369306 TMEM88BA6NKF7 163 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 TTI1O43156 1089 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 PHF2O75151 1096 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 C6orf222P0C671 652 aaPredicted RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 NKX3-2P78367 333 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 TAP1Q03518 808 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 PTPN11Q06124 597 aaPredicted RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 MYO1EQ12965 1108 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 DHX34Q14147 1143 aaKnown RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 CYP1B1Q16678 543 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 PPP1R15BQ5SWA1 713 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 TAF2Q6P1X5 1199 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 ERICH1Q86X53 443 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 DDX27Q96GQ7 796 aaKnown RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 MTG1Q9BT17 334 aaPredicted RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 NXF3Q9H4D5 531 aaKnown RBP16.29■□□□□ 0.2
PEX11B-201ENST00000369306 HMGXB4Q9UGU5 601 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 IP6K2Q9UHH9 426 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 GABRQQ9UN88 632 aa16.29■□□□□ 0.2
PEX11B-201ENST00000369306 RALGAPA2Q2PPJ7 1873 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FAM187AA6NFU0 413 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FSCN2O14926 492 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 PSTPIP1O43586 416 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 RECQL4O94761 1208 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 ECHS1P30084 290 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 CHRNA3P32297 505 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 RPL7AP62424 266 aaKnown RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 DR1Q01658 176 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 GABPB1Q06547 395 aaPredicted RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 SIX1Q15475 284 aaPredicted RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 GNASQ5JWF2 1037 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 UBXN11Q5T124 520 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 DNAJC24Q6P3W2 148 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 C3orf20Q8ND61 904 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 TSPAN18Q96SJ8 248 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 TRIM6Q9C030 488 aaPredicted RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 MED4Q9NPJ6 270 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 PCYOX1Q9UHG3 505 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 MTUS1Q9ULD2 1270 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 STRIP2Q9ULQ0 834 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 PIN4Q9Y237 131 aaKnown RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 HES2Q9Y543 173 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 TRIP12Q14669 1992 aaPredicted RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 TCRBV7S2A1N4TA0A589 114 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 HMGCRP04035 888 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FAM153BP0C7A2 387 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 VDRP11473 427 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FLT3LGP49771 235 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 CNGA2Q16280 664 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FAM153CQ494X1 144 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 XKR4Q5GH76 650 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 RHOT1Q8IXI2 618 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 MREGQ8N565 214 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 LRRC52Q8N7C0 313 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 C12orf50Q8NA57 414 aaPredicted RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 SMC1BQ8NDV3 1235 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 BEST2Q8NFU1 509 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 CELF4Q9BZC1 486 aaKnown RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 FAM153AQ9UHL3 310 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 CYTH4Q9UIA0 394 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 KIAA1257Q9ULG3 409 aa16.28■□□□□ 0.2
PEX11B-201ENST00000369306 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 UTP11Q9Y3A2 253 aaKnown RBP16.28■□□□□ 0.2
PEX11B-201ENST00000369306 GJB6O95452 261 aa16.27■□□□□ 0.19
PEX11B-201ENST00000369306 RARAP10276 462 aa16.27■□□□□ 0.19
PEX11B-201ENST00000369306 NDST1P52848 882 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms