RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 L1RE1Q9UN81 338 aa20.41■□□□□ 0.86
CKS1B-203ENST00000368439 TULP1O00294 542 aaPredicted RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 NARSO43776 548 aaKnown RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 PDGFBP01127 241 aaPredicted RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 CCR2P41597 374 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 SNW1Q13573 536 aaKnown RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 DUOXA2Q1HG44 320 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 LIMS2Q7Z4I7 341 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 LRRTM3Q86VH5 581 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 METTL23Q86XA0 190 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 SLC9A9Q8IVB4 645 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 PDCL2Q8N4E4 241 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 TTC9BQ8N6N2 239 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 ENGASEQ8NFI3 743 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 ST13P5Q8NFI4 369 aaPredicted RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 PLEKHO2Q8TD55 490 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 FGF14Q92915 247 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 CGRRF1Q99675 332 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 CORO1BQ9BR76 489 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 RPP25Q9BUL9 199 aaKnown RBP20.4■□□□□ 0.86
CKS1B-203ENST00000368439 DNAJC25Q9H1X3 360 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 HSFX1Q9UBD0 423 aa20.4■□□□□ 0.86
CKS1B-203ENST00000368439 PDXKO00764 312 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 MOSPD3O75425 235 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 TNNC2P02585 160 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 KRT19P08727 400 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 EPHA5P54756 1037 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 BFSP1Q12934 665 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 SLC39A12Q504Y0 691 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 PARM1Q6UWI2 310 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 TRAPPC11Q7Z392 1133 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 HS6ST3Q8IZP7 471 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 THEM5Q8N1Q8 247 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 FBXL6Q8N531 539 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 GOLGA5Q8TBA6 731 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 ING5Q8WYH8 240 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 ZNF516Q92618 1163 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 TCEAL4Q96EI5 215 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 LRRC3Q9BY71 257 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 SLC27A5Q9Y2P5 690 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 MRPS23Q9Y3D9 190 aaKnown RBP20.39■□□□□ 0.85
CKS1B-203ENST00000368439 NUMBLQ9Y6R0 609 aa20.39■□□□□ 0.85
CKS1B-203ENST00000368439 WDFY4Q6ZS81 3184 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 MICAL2O94851 1124 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 CST3P01034 146 aaPredicted RBP20.38■□□□□ 0.85
CKS1B-203ENST00000368439 DLATP10515 647 aaKnown RBP20.38■□□□□ 0.85
CKS1B-203ENST00000368439 CEBPBP17676 345 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 KCNB1Q14721 858 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 OSTM1Q86WC4 334 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 TOP6BLQ8N6T0 577 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 CCDC127Q96BQ5 260 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 ZNF512Q96ME7 567 aaPredicted RBP20.38■□□□□ 0.85
CKS1B-203ENST00000368439 HCN4Q9Y3Q4 1203 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 ARIH1Q9Y4X5 557 aaPredicted RBP20.38■□□□□ 0.85
CKS1B-203ENST00000368439 SNX9Q9Y5X1 595 aa20.38■□□□□ 0.85
CKS1B-203ENST00000368439 GABRDO14764 452 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 EXOC3O60645 756 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 HUS1O60921 280 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 SOWAHAQ2M3V2 549 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 TMC8Q8IU68 726 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 TMEM86AQ8N2M4 240 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 SPATA18Q8TC71 538 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 HPDLQ96IR7 371 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 PKMYT1Q99640 499 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 TMLHEQ9NVH6 421 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 TRAF3IP3Q9Y228 551 aa20.37■□□□□ 0.85
CKS1B-203ENST00000368439 PRPF40AO75400 957 aaKnown RBP20.36■□□□□ 0.85
CKS1B-203ENST00000368439 SOAT2O75908 522 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 NR3C1P04150 777 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 TNNI1P19237 187 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 CASP4P49662 377 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 CDR1P51861 262 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 CLDN10P78369 228 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 SMARCB1Q12824 385 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 PLD1Q13393 1074 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 IQCEQ6IPM2 695 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 PDZD4Q76G19 769 aaPredicted RBP20.36■□□□□ 0.85
CKS1B-203ENST00000368439 ELMOD1Q8N336 334 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 PARD3BQ8TEW8 1205 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 C2orf15Q8WU43 125 aaKnown RBP20.36■□□□□ 0.85
CKS1B-203ENST00000368439 KBTBD7Q8WVZ9 684 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 MCRS1Q96EZ8 462 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 FNBP1Q96RU3 617 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 ACBD6Q9BR61 282 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 GDE1Q9NZC3 331 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 MUC6Q6W4X9 2439 aa20.36■□□□□ 0.85
CKS1B-203ENST00000368439 ZNF197O14709 1029 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 HCRTO43612 131 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 SRFP11831 508 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 ATF6P18850 670 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 VCPP55072 806 aaKnown RBP20.35■□□□□ 0.85
CKS1B-203ENST00000368439 MYO1EQ12965 1108 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 PNOCQ13519 176 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 MTSS1LQ765P7 747 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 DPH6Q7L8W6 267 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 LEMD2Q8NC56 503 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 CCDC47Q96A33 483 aaKnown RBP20.35■□□□□ 0.85
CKS1B-203ENST00000368439 ASAH2Q9NR71 780 aa20.35■□□□□ 0.85
CKS1B-203ENST00000368439 DDX43Q9NXZ2 648 aaKnown RBP20.35■□□□□ 0.85
CKS1B-203ENST00000368439 DENND4CQ5VZ89 1909 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms