RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 COPS7BQ9H9Q2 264 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 NMRK1Q9NWW6 199 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 DBNLQ9UJU6 430 aaKnown RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 KIAA1257Q9ULG3 409 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 MAGED2Q9UNF1 606 aaPredicted RBP3.93□□□□□ -1.78
SYNE1-207ENST00000367255 REM1O75628 298 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 SGO2Q562F6 1265 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 GADL1Q6ZQY3 521 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 RELL1Q8IUW5 271 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 LINC00301Q8NCQ3 95 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 CYP4F11Q9HBI6 524 aa3.93□□□□□ -1.78
SYNE1-207ENST00000367255 PDXKO00764 312 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MCM7P33993 719 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC157Q569K6 752 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RNF43Q68DV7 783 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 IGSF9BQ9UPX0 1349 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 POLA2Q14181 598 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GRAMD1CQ8IYS0 662 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 VAT1Q99536 393 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PRKD2Q9BZL6 878 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 STX18Q9P2W9 335 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ZFP69BQ9UJL9 534 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ATP7AQ04656 1500 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TK2O00142 265 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GMFGO60234 142 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 C5orf22Q49AR2 442 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 KATNAL2Q8IYT4 538 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 HAUS7Q99871 368 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RRN3Q9NYV6 651 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 AKAP8O43823 692 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SARSP49591 514 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MRI1Q9BV20 369 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EVA1AQ9H8M9 152 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 NANSQ9NR45 359 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ZNF446Q9NWS9 450 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CAPN6Q9Y6Q1 641 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MDH1P40925 334 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EFR3AQ14156 821 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TYSND1Q2T9J0 566 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MMEL1Q495T6 779 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EIF3MQ7L2H7 374 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PEX13Q92968 403 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SOX11P35716 441 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GNGT1P63211 74 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MAD2L1Q13257 205 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SPANXN2Q5MJ10 180 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SH3GL2Q99962 352 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CARD14Q9BXL6 1004 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ZMYND12Q9H0C1 365 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RAB26Q9ULW5 256 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 YTHDC2Q9H6S0 1430 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TRDMT1O14717 391 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TULP3O75386 442 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SRPRAP08240 638 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CES1P23141 567 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CA9Q16790 459 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 STXBP5Q5T5C0 1151 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MIS18BP1Q6P0N0 1132 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 BBS5Q8N3I7 341 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FAM133AQ8N9E0 248 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FTOQ9C0B1 505 aaKnown RBP eCLIP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FCHO2Q0JRZ9 810 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 BRDTQ58F21 947 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 USP27XA6NNY8 438 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 RSBN1LQ6PCB5 846 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 FRMD5Q7Z6J6 570 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 SPANXA1Q9NS26 97 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TAB2Q9NYJ8 693 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ATRXP46100 2492 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TRAPPC3O43617 180 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 BAIAP2L2Q6UXY1 529 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 L1RE1Q9UN81 338 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MBD5Q9P267 1494 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TTC37Q6PGP7 1564 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CCDC154A6NI56 674 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 GYG2O15488 501 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ATP6V1C1P21283 382 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CREB3L1Q96BA8 519 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 CACFD1Q9UGQ2 172 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TFR2Q9UP52 801 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TMEM94Q12767 1356 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 PHF20L1A8MW92 1017 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 KCNJ18B7U540 433 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 IRF6O14896 467 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 HSPA4LO95757 839 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TNNC2P02585 160 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 LGALS3BPQ08380 585 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 KCNJ12Q14500 433 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ZCCHC8Q6NZY4 707 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 HIPK4Q8NE63 616 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MAGEB18Q96M61 343 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 EME2A4GXA9 379 aaPredicted RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 C2orf71A6NGG8 1288 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 S100A9P06702 114 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TRAPPC2P0DI81 140 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 TRAPPC2BP0DI82 140 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 MAPTP10636 758 aaKnown RBP3.92□□□□□ -1.78
SYNE1-207ENST00000367255 STAT2P52630 851 aa3.92□□□□□ -1.78
SYNE1-207ENST00000367255 ARFIP1P53367 373 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms