RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 SMG5Q9UPR3 1016 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 ESRRGP62508 458 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CENPCQ03188 943 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 YAF2Q8IY57 180 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 NOA1Q8NC60 698 aaKnown RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CATSPERBQ9H7T0 1116 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CHMP2BQ9UQN3 213 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 VWA5AO00534 786 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 VTNP04004 478 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 PSMC6P62333 389 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 AMHR2Q16671 573 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 OLFML3Q9NRN5 406 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 MORC2Q9Y6X9 1032 aaPredicted RBP17.3■□□□□ 0.36
SCAF8-201ENST00000367178 H0Y3Z8 333 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 GPR182O15218 404 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 ANP32DO95626 131 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 LONRF1Q17RB8 773 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 SH2D3CQ8N5H7 860 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CPA4Q9UI42 421 aa17.3■□□□□ 0.36
SCAF8-201ENST00000367178 CARSP49589 748 aaKnown RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 CXCL11O14625 94 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 PPP1R37O75864 691 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 TGFB3P10600 412 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 ODC1P11926 461 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 LBRQ14739 615 aaKnown RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 SZRD1Q7Z422 152 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 CHSY1Q86X52 802 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 DDX42Q86XP3 938 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 TAS1R2Q8TE23 839 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 ABI2Q9NYB9 513 aaPredicted RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 DBR1Q9UK59 544 aaKnown RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 TMCC1O94876 653 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 GFAPP14136 432 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 LCA5Q86VQ0 697 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 SLC13A5Q86YT5 568 aaPredicted RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 AGR3Q8TD06 166 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 KIAA1257Q9ULG3 409 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 SMAPO00193 183 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 STAG3L1P0CL83 205 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 CYP11B1P15538 503 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 VEGFAP15692 232 aaPredicted RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 KYNUQ16719 465 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 LRIG3Q6UXM1 1119 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 CNPY4Q8N129 248 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 TTC30BQ8N4P2 665 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 ZC3H15Q8WU90 426 aaKnown RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 KCNQ5Q9NR82 932 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 PSMC3IPQ9P2W1 217 aaPredicted RBP17.29■□□□□ 0.36
SCAF8-201ENST00000367178 PCDHB7Q9Y5E2 793 aa17.29■□□□□ 0.36
SCAF8-201ENST00000367178 H3BRB1 525 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ACO1P21399 889 aaKnown RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ZNF200P98182 395 aaPredicted RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 CDKAL1Q5VV42 579 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MMGT1Q8N4V1 131 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 DCUN1D1Q96GG9 259 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 POP1Q99575 1024 aaKnown RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ZSWIM1Q9BR11 485 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 TUT1Q9H6E5 874 aaKnown RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ETNK1Q9HBU6 452 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 THEGQ9P2T0 379 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 PLSCR1O15162 318 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 EEF1B2P24534 225 aaKnown RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ST8SIA6P61647 398 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ORC1Q13415 861 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 THEMIS2Q5TEJ8 643 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 C1orf146Q5VVC0 180 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ACOT1Q86TX2 421 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 EFHBQ8N7U6 833 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 PTPRN2Q92932 1015 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 SH3KBP1Q96B97 665 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 LBHD1Q9BQE6 289 aaPredicted RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 WWP1Q9H0M0 922 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MUC3BQ9H195 1237 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.28■□□□□ 0.366e-9■■■■□ 25.1
SCAF8-201ENST00000367178 CCDC22O60826 627 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 VDRP11473 427 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 EPHB2P29323 1055 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 RARRES1P49788 294 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 ITGA8P53708 1063 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MTM1Q13496 603 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MYBPC2Q14324 1141 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 FKBP1CQ5VVH2 108 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 REXO1L1PQ8IX06 675 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 DDIASQ8IXT1 998 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 DDIT4Q9NX09 232 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MROH1Q8NDA8 1641 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 FAM86B1E9PN63 330 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MTSS1O43312 755 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 PPFIA2O75334 1257 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 LMNAP02545 664 aaKnown RBP17.28■□□□□ 0.36
SCAF8-201ENST00000367178 FAM86B2P0C5J1 330 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 MAGEA4P43358 317 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 SERPINB9P50453 376 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 EFTUD2Q15029 972 aaKnown RBP eCLIP17.28■□□□□ 0.364e-11■■■■■ 57.9
SCAF8-201ENST00000367178 PBXIP1Q96AQ6 731 aa17.28■□□□□ 0.36
SCAF8-201ENST00000367178 A0A087WZ62 844 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms