RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 CDK12Q9NYV4 1490 aaPredicted RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 LINC01548A6NM66 108 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 HTRA2O43464 458 aaPredicted RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 IGSF3O75054 1194 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 NDUFS2O75306 463 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 LATS1O95835 1130 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 CD1AP06126 327 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 PPP3CBP16298 524 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 FXR1P51114 621 aaKnown RBP eCLIP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SLC16A1P53985 500 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 TFF2Q03403 129 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 TCF15Q12870 199 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SLC10A2Q12908 348 aaPredicted RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 LLGL1Q15334 1064 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 CD300EQ496F6 205 aaPredicted RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 TSTD2Q5T7W7 516 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 PPP4R3AQ6IN85 833 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 RSPH3Q86UC2 560 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 C1orf162Q8NEQ5 155 aaPredicted RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 TMIEQ8NEW7 156 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 NSUN6Q8TEA1 469 aaKnown RBP2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 COG1Q8WTW3 980 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 JADE3Q92613 823 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SCAMP4Q969E2 229 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 RFKQ969G6 155 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 LRIG1Q96JA1 1093 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 DMRTA2Q96SC8 542 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SLC29A3Q9BZD2 475 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SLC5A4Q9NY91 659 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 CADPSQ9ULU8 1353 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 SBNO2Q9Y2G9 1366 aa2.23□□□□□ -2.05
RNU4-41P-201ENST00000364426 BCL9LQ86UU0 1499 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 MANSC4A6NHS7 340 aaPredicted RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 LINC00473A8K010 186 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 VWC2LB2RUY7 222 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 E9PLN8 166 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 SOAT2O75908 522 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 URI1O94763 535 aaPredicted RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 CHEK2O96017 543 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 C5AR1P21730 350 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 LPOP22079 712 aaPredicted RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 EDNRBP24530 442 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 CYP2C19P33261 490 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 NPTX2P47972 431 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 HNRNPMP52272 730 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 ZNF280AP59817 542 aaPredicted RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 KRTAP10-9P60411 292 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 MC2RQ01718 297 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 CLUL1Q15846 466 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 EZH2Q15910 746 aaKnown RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 SUMO4Q6EEV6 95 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 TAPT1Q6NXT6 567 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 TSHZ1Q6ZSZ6 1077 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 DDX42Q86XP3 938 aaKnown RBP eCLIP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 FAM109AQ8N4B1 249 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 AOPEPQ8N6M6 819 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 CNTD1Q8N815 330 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 PDPRQ8NCN5 879 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 B3GALNT2Q8NCR0 500 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 TOR1AIP2Q8NFQ8 470 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 HAPLN3Q96S86 360 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 SMOQ99835 787 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 VKORC1Q9BQB6 163 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 GPR35Q9HC97 309 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 SERTAD4Q9NUC0 356 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 ETAA1Q9NY74 926 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 PCDHA13Q9Y5I0 950 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 CFAP20Q9Y6A4 193 aaKnown RBP2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 LRRC7Q96NW7 1537 aa2.22□□□□□ -2.05
RNU4-41P-201ENST00000364426 A0A0B4J269 797 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 WDR91A4D1P6 747 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 NT5C1B-RDH14C9J2C7 533 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 FZD9O00144 591 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TOR1BO14657 336 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 KCNAB3O43448 404 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TRIAP1O43715 76 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 PCDHGA12O60330 932 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TTLL1O95922 423 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 RPLP2P05387 115 aaKnown RBP2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 CHRM2P08172 466 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 FTH1P19P0C7X4 201 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 DRD4P21917 467 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 PCSK6P29122 969 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 CTGFP29279 349 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 EIF2B5Q13144 721 aaKnown RBP2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TUBB3Q13509 450 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 C3orf36Q3SXR2 165 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 FAM153CQ494X1 144 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 PREPLQ4J6C6 727 aaPredicted RBP2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 C11orf87Q6NUJ2 197 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 PGM2L1Q6PCE3 622 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 GADL1Q6ZQY3 521 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 BHLHA9Q7RTU4 235 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 AMIGO2Q86SJ2 522 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TTC7BQ86TV6 843 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 FAM9AQ8IZU1 332 aaPredicted RBP2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 PPM1NQ8N819 430 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 COA7Q96BR5 231 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 FAXDC2Q96IV6 333 aa2.21□□□□□ -2.06
RNU4-41P-201ENST00000364426 TRIB1Q96RU8 372 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms