RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 GTF2H3Q13889 308 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ARMC4Q5T2S8 1044 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 C18orf8Q96DM3 657 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ECSITQ9BQ95 431 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ILKAPQ9H0C8 392 aaPredicted RBP13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ATMINO43313 823 aaPredicted RBP13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 TCF3P15923 654 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 DDX5P17844 614 aaKnown RBP13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 MAPK11Q15759 364 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ZBTB49Q6ZSB9 765 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 ASAP3Q8TDY4 903 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 RMDN1Q96DB5 314 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 EIF2AK1Q9BQI3 630 aaKnown RBP13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 LXNQ9BS40 222 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 TBC1D22BQ9NU19 505 aa13.99□□□□□ -0.17
CCDC144A-203ENST00000360495 KRT87PA6NCN2 255 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 MOCS2O96007 188 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 QARSP47897 775 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 PIGHQ14442 188 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 LMBRD2Q68DH5 695 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 TTC23LQ6PF05 361 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 TTC39CQ8N584 583 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 KLHL31Q9H511 634 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 TOPORSQ9NS56 1045 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 ABCB11O95342 1321 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 IGSF1Q8N6C5 1336 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 POLBP06746 335 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 COG2Q14746 738 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 THEMIS2Q5TEJ8 643 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 STOX1Q6ZVD7 989 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 C2CD2Q9Y426 696 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 CLASP1Q7Z460 1538 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 ADGRA2Q96PE1 1338 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 USP17L10C9JJH3 530 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 RHOBTB1O94844 696 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 RECQLP46063 649 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 DCTN2Q13561 401 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SGSM1Q2NKQ1 1148 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 HAUS6Q7Z4H7 955 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 LRRC6Q86X45 466 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 TPCN2Q8NHX9 752 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 WDR60Q8WVS4 1066 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 CAVIN3Q969G5 261 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 RIC8BQ9NVN3 520 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 DCDC2Q9UHG0 476 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 FSBPO95073 299 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 AQP5P55064 265 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 EXOSC10Q01780 885 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SLC20A2Q08357 652 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 USPL1Q5W0Q7 1092 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 PAPD7Q5XG87 772 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SLC13A5Q86YT5 568 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SHCBP1Q8NEM2 672 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 BEST2Q8NFU1 509 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 ASIC4Q96FT7 647 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 CPSF1Q10570 1443 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SUPT3HB4E1H0 165 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 ATP4AP20648 1035 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 IL12RB1P42701 662 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 TPI1P60174 286 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 FUT11Q495W5 492 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 Q4G0T1 1027 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 LRRC74BQ6ZQY2 392 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SCN4BQ8IWT1 228 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SPATA18Q8TC71 538 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 GDPD5Q8WTR4 605 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 RSPH1Q8WYR4 309 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SYN2Q92777 582 aaPredicted RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 AGO2Q9UKV8 859 aaKnown RBP13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 SPATA2Q9UM82 520 aa13.98□□□□□ -0.17
CCDC144A-203ENST00000360495 FAM205CA6NFA0 338 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 TAF4O00268 1085 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 TNFAIP8O95379 198 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 KRT76Q01546 638 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PKN3Q6P5Z2 889 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 SH3RF3Q8TEJ3 882 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PRCCQ92733 491 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 MCRS1Q96EZ8 462 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 RARGP13631 454 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 CDC25CP30307 473 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 AP3M2P53677 418 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 ZNF235Q14590 738 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 THEM5Q8N1Q8 247 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 SLC25A41Q8N5S1 370 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 KRT35Q92764 455 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 SH3KBP1Q96B97 665 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 C19orf60Q96EN9 201 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 RMND5BQ96G75 393 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 CEP44Q9C0F1 390 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 FAM49AQ9H0Q0 323 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 HPS4Q9NQG7 708 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 ZSCAN32Q9NX65 697 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 STK32BQ9NY57 414 aa13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 DMGDHQ9UI17 866 aaKnown RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.97□□□□□ -0.17
CCDC144A-203ENST00000360495 PSMD3O43242 534 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms