RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 MTMR2Q13614 643 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 HSPBP1Q9NZL4 362 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 MOCS2O96007 188 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 KPNA1P52294 538 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 POLD3Q15054 466 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 LUZP2Q86TE4 346 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 ZNF280CQ8ND82 737 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 CLMNQ96JQ2 1002 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SH3GL1Q99961 368 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 AP4S1Q9Y587 144 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 GEMP55040 296 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 COBLL1Q53SF7 1204 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PLA2G12BQ9BX93 195 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 NUP62P37198 522 aaPredicted RBP10.1□□□□□ -0.79
CUX1-203ENST00000360264 BOLA3Q53S33 107 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 SPATA18Q8TC71 538 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 CHD4Q14839 1912 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 TBC1D12O60347 775 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 BTNL9Q6UXG8 535 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 C2orf81A6NN90 581 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 GRK3P35626 688 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 RAD23BP54727 409 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 EMC2Q15006 297 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 AGAP9Q5VTM2 703 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 HERC6Q8IVU3 1022 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 VPS33BQ9H267 617 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 PCDHB2Q9Y5E7 798 aa10.1□□□□□ -0.79
CUX1-203ENST00000360264 GPR182O15218 404 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 GUCY1A2P33402 732 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ALDH18A1P54886 795 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 CHST13Q8NET6 341 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 APBB2Q92870 758 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 RSAD1Q9HA92 442 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 GUCY1A3Q02108 690 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ELMO2Q96JJ3 720 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SEPT5Q99719 369 aaPredicted RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 MTO1Q9Y2Z2 717 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 RPS12P25398 132 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 CENPAP49450 140 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 CYTH1Q15438 398 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 PIH1D3Q9NQM4 214 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 VPS51Q9UID3 782 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 AAR2Q9Y312 384 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 EXTL3O43909 919 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 MGAT5BQ3V5L5 792 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ATP6V0D2Q8N8Y2 350 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 HPS3Q969F9 1004 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ARHGEF26Q96DR7 871 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 TAF1CQ15572 869 aaPredicted RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 WNK4Q96J92 1243 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 P4HA2O15460 535 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 PRIM2P49643 509 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SKP1P63208 163 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 WLSQ5T9L3 541 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SESN1Q9Y6P5 492 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 A0A1W2PQC6 194 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 HPGDP15428 266 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 NCAPHQ15003 741 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 EZH2Q15910 746 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 EFHC1Q5JVL4 640 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 USP6NLQ92738 828 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SAAL1Q96ER3 474 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SOX6P35712 828 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ATP2C1P98194 919 aaPredicted RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 KBTBD12Q3ZCT8 623 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ANTXR1Q9H6X2 564 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 WWOXQ9NZC7 414 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ITIH6Q6UXX5 1313 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 H0Y3Z8 333 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 BFSP2Q13515 415 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 TIGD7Q6NT04 549 aaPredicted RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 SYNE4Q8N205 404 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 DPP10Q8N608 796 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 AGPAT1Q99943 283 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.09□□□□□ -0.794e-7■■■□□ 17.6
CUX1-203ENST00000360264 RPS6KB2Q9UBS0 482 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 MAP3K4Q9Y6R4 1608 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 FAM200BP0CF97 657 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SNAP25P60880 206 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 USP10Q14694 798 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 CCDC92Q53HC0 331 aaPredicted RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 SPTBP11277 2137 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 PGM1P36871 562 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ST13P50502 369 aaKnown RBP10.09□□□□□ -0.79
CUX1-203ENST00000360264 COPAP53621 1224 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 VSNL1P62760 191 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 HS6ST3Q8IZP7 471 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 NUP93Q8N1F7 819 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 CNBD2Q96M20 576 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 AHSPQ9NZD4 102 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 ADCY10Q96PN6 1610 aa10.09□□□□□ -0.79
CUX1-203ENST00000360264 SPTA1P02549 2419 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ENTPD3O75355 529 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 ENO1P06733 434 aaKnown RBP10.08□□□□□ -0.8
CUX1-203ENST00000360264 VCAM1P19320 739 aa10.08□□□□□ -0.8
CUX1-203ENST00000360264 FNTAP49354 379 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms