RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 ADGRF2Q8IZF7 708 aa23.33■■□□□ 1.33
HOXA4-201ENST00000360046 TOP6BLQ8N6T0 577 aa23.33■■□□□ 1.33
HOXA4-201ENST00000360046 OR6B3Q8NGW1 331 aa23.33■■□□□ 1.33
HOXA4-201ENST00000360046 SYT11Q9BT88 431 aa23.33■■□□□ 1.33
HOXA4-201ENST00000360046 NRDE2Q9H7Z3 1164 aa23.33■■□□□ 1.33
HOXA4-201ENST00000360046 TRMT1Q9NXH9 659 aaKnown RBP23.33■■□□□ 1.33
HOXA4-201ENST00000360046 PRG3Q9Y2Y8 225 aaPredicted RBP23.33■■□□□ 1.33
HOXA4-201ENST00000360046 F8W810 466 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 THAP12O43422 761 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 KRT83P78385 493 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 CDR2Q01850 454 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 PDCL2Q8N4E4 241 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 LNX1Q8TBB1 728 aaPredicted RBP23.33■■□□□ 1.32
HOXA4-201ENST00000360046 TWNKQ96RR1 684 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 ELOVL4Q9GZR5 314 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 SNX25Q9H3E2 840 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 CXXC1Q9P0U4 656 aaPredicted RBP23.33■■□□□ 1.32
HOXA4-201ENST00000360046 HCSTQ9UBK5 93 aa23.33■■□□□ 1.32
HOXA4-201ENST00000360046 I3L4J1 428 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 DDX3XO00571 662 aaKnown RBP eCLIP23.32■■□□□ 1.32
HOXA4-201ENST00000360046 ZSCAN12O43309 604 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 TACC1O75410 805 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 MMEP08473 750 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 CD19P15391 556 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 RAD23BP54727 409 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 TIGD5Q53EQ6 642 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 SMYD5Q6GMV2 418 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 CCAR2Q8N163 923 aaKnown RBP23.32■■□□□ 1.32
HOXA4-201ENST00000360046 WHAMMQ8TF30 809 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 KBTBD7Q8WVZ9 684 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 NT5C1AQ9BXI3 368 aa23.32■■□□□ 1.32
HOXA4-201ENST00000360046 ZNF263O14978 683 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 LCA5LO95447 670 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 ITGB1P05556 798 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 CHRNB2P17787 502 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 BRCC3P46736 316 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 AARSP49588 968 aaKnown RBP eCLIP23.31■■□□□ 1.32
HOXA4-201ENST00000360046 DPH6Q7L8W6 267 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 ZNF677Q86XU0 584 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 SLC4A11Q8NBS3 891 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 HERVK_113Q902F9 699 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 DDX1Q92499 740 aaKnown RBP23.31■■□□□ 1.32
HOXA4-201ENST00000360046 TMEM176AQ96HP8 235 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 PDCL3Q9H2J4 239 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 REXO2Q9Y3B8 237 aaKnown RBP23.31■■□□□ 1.32
HOXA4-201ENST00000360046 SLC4A7Q9Y6M7 1214 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 PTPRSQ13332 1948 aa23.31■■□□□ 1.32
HOXA4-201ENST00000360046 USP27XA6NNY8 438 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 A8MXQ7 604 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 PAEPP09466 180 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 ODC1P11926 461 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 PAX3P23760 479 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 BRD2P25440 801 aaKnown RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 GNL1P36915 607 aaPredicted RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 FMO1Q01740 532 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 WSCD1Q658N2 575 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 CD300LGQ6UXG3 332 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 LIMS2Q7Z4I7 341 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 KIAA1328Q86T90 577 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 OLIG1Q8TAK6 271 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 ZBED2Q9BTP6 218 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 MTIF3Q9H2K0 278 aaKnown RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 NAGPAQ9UK23 515 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 FAM170AA1A519 330 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 CCP110O43303 1012 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 MAGEA10P43363 369 aaPredicted RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 RGS19P49795 217 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 CCDC122Q5T0U0 273 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 UNC93AQ86WB7 457 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 PALB2Q86YC2 1186 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 SLC30A5Q8TAD4 765 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 HEXIM2Q96MH2 286 aaKnown RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 YME1L1Q96TA2 773 aa23.3■■□□□ 1.32
HOXA4-201ENST00000360046 TIMM13Q9Y5L4 95 aaPredicted RBP23.3■■□□□ 1.32
HOXA4-201ENST00000360046 COL4A6Q14031 1691 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 TMCO5BA8MYB1 307 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 TMEM189-UBE2V1I3L0A0 370 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 NRP1O14786 923 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 ALDH2P05091 517 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 PDGFRBP09619 1106 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 WARSP23381 471 aaKnown RBP23.29■■□□□ 1.32
HOXA4-201ENST00000360046 SSTR3P32745 418 aaPredicted RBP23.29■■□□□ 1.32
HOXA4-201ENST00000360046 SLC11A1P49279 550 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 ALKBH5Q6P6C2 394 aaKnown RBP23.29■■□□□ 1.32
HOXA4-201ENST00000360046 TMEM86AQ8N2M4 240 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 ZNF606Q8WXB4 792 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 TMEM175Q9BSA9 504 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 LUC7LQ9NQ29 371 aaKnown RBP23.29■■□□□ 1.32
HOXA4-201ENST00000360046 FAN1Q9Y2M0 1017 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 PCDHA13Q9Y5I0 950 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 TSC2P49815 1807 aa23.29■■□□□ 1.32
HOXA4-201ENST00000360046 HCRTO43612 131 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 TADA2AO75478 443 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 PBX3P40426 434 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 MAGEA1P43355 309 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 BTG3Q14201 252 aaPredicted RBP23.28■■□□□ 1.32
HOXA4-201ENST00000360046 SPOUT1Q5T280 376 aaKnown RBP23.28■■□□□ 1.32
HOXA4-201ENST00000360046 ACOT1Q86TX2 421 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 TFAP2BQ92481 460 aa23.28■■□□□ 1.32
HOXA4-201ENST00000360046 ZNF689Q96CS4 500 aaPredicted RBP23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms