RNA–Protein interactions for RNA: ENST00000359902.2

CCDC88B-203, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 1 (best) BASIC

Gene CCDC88B, Length 2,326 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-203ENST00000359902 PCDHGC3Q9UN70 934 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 KCNH4Q9UQ05 1017 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 C5orf60A6NFR6 353 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 F8VP50 259 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 PI4K2BG5E9Z4 385 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 INO80B-WBP1J3KQ70 363 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 CDH5P33151 784 aaPredicted RBP22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 OGDHQ02218 1023 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 MOGSQ13724 837 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 PPP1R15BQ5SWA1 713 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 DNAJC24Q6P3W2 148 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 SCARA5Q6ZMJ2 495 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 CDR2LQ86X02 465 aaPredicted RBP22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 CEP120Q8N960 986 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 INO80BQ9C086 356 aaPredicted RBP22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 STMN4Q9H169 189 aaPredicted RBP22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 SMARCAD1Q9H4L7 1026 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 IVNS1ABPQ9Y6Y0 642 aa22.06■■□□□ 1.12
CCDC88B-203ENST00000359902 KIAA0754O94854 1291 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 TTC4O95801 387 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 EIF4BP23588 611 aaKnown RBP22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 LIG3P49916 1009 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 TFDP1Q14186 410 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 EFCAB12Q6NXP0 572 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 ZNF365Q70YC5 407 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 OTUD6BQ8N6M0 293 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 CCDC89Q8N998 374 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 SLITRK1Q96PX8 696 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 TNNC2P02585 160 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 KRT10P13645 584 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 CETN2P41208 172 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 SLC26A2P50443 739 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 LONRF1Q17RB8 773 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 LRRC38Q5VT99 294 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 ATXN2LQ8WWM7 1075 aaKnown RBP22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 RBM41Q96IZ5 413 aaKnown RBP22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 PWWP2AQ96N64 755 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 MINDY3Q9H8M7 445 aa22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 DNAJC17Q9NVM6 304 aaKnown RBP22.05■■□□□ 1.12
CCDC88B-203ENST00000359902 HBP1O60381 514 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 TXNP10599 105 aaKnown RBP22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 DRD4P21917 467 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 KLRC2P26717 231 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 CLCN3P51790 818 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 KYNUQ16719 465 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 DCUN1D2Q6PH85 259 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 MFSD7Q6UXD7 560 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 ERICH1Q86X53 443 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 ANKRD36BP1Q96IX9 119 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 PDGFCQ9NRA1 345 aa22.04■■□□□ 1.12
CCDC88B-203ENST00000359902 SBF1O95248 1867 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 CPP00450 1065 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 IQCF3P0C7M6 154 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 MBTD1Q05BQ5 628 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 IFT88Q13099 833 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 KAZNQ674X7 775 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 TMEM192Q8IY95 271 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 CDT1Q9H211 546 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 POLIQ9UNA4 740 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 KRT1P04264 644 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 TAP1Q03518 808 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 CHADLQ6NUI6 762 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 PRUNE1Q86TP1 453 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 MICALL1Q8N3F8 863 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 BBOF1Q8ND07 529 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 CHMP6Q96FZ7 201 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 SEC16BQ96JE7 1060 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 SERPINB12Q96P63 405 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 RNPEPQ9H4A4 650 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 NXF1Q9UBU9 619 aaKnown RBP22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 TNFSF13BQ9Y275 285 aa22.03■■□□□ 1.12
CCDC88B-203ENST00000359902 LIASO43766 372 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 PPIL2Q13356 520 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 PIGHQ14442 188 aaPredicted RBP22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 TMEM132AQ24JP5 1023 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 CCDC38Q502W7 563 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 ZFYVE27Q5T4F4 411 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 CYP4A22Q5TCH4 519 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 WDR78Q5VTH9 848 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 TXNRD3NBQ6F5E7 133 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 DENND1BQ6P3S1 775 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 ARMC9Q7Z3E5 817 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 EXOC3L1Q86VI1 746 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 ZNF317Q96PQ6 595 aaPredicted RBP22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 MCM3APO60318 1980 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 TJP3O95049 919 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 CXCL8P10145 99 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 IZUMO3Q5VZ72 239 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 SMYD5Q6GMV2 418 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 GSTA5Q7RTV2 222 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 CPLX4Q7Z7G2 160 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 IPO4Q8TEX9 1081 aaKnown RBP22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 NINJ2Q9NZG7 142 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 DNPEPQ9ULA0 475 aa22.02■■□□□ 1.12
CCDC88B-203ENST00000359902 ASAP2O43150 1006 aa22.01■■□□□ 1.11
CCDC88B-203ENST00000359902 ATF7P17544 494 aaPredicted RBP22.01■■□□□ 1.11
CCDC88B-203ENST00000359902 LMNB2Q03252 620 aa22.01■■□□□ 1.11
CCDC88B-203ENST00000359902 SPOCD1Q6ZMY3 1216 aa22.01■■□□□ 1.11
CCDC88B-203ENST00000359902 NIPA2Q8N8Q9 360 aa22.01■■□□□ 1.11
CCDC88B-203ENST00000359902 MROH8Q9H579 483 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms