RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 DLL1O00548 723 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 BUB1O43683 1085 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 RPS6KA5O75582 802 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PALMO75781 387 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 KIF4AO95239 1232 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PAEPP09466 180 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZSCAN20P17040 1043 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 CYP3A5P20815 502 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PAX3P23760 479 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 POLR2BP30876 1174 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 RAB27AP51159 221 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 WDR5P61964 334 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 TAP1Q03518 808 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 ITIH3Q06033 890 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 RAB30Q15771 203 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 SEZ6Q53EL9 994 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZBTB41Q5SVQ8 909 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 JADE1Q6IE81 842 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PEX26Q7Z412 305 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 DAAM2Q86T65 1068 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 NOP9Q86U38 636 aaKnown RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 UBL4BQ8N7F7 174 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 RBBP8NLQ8NC74 664 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 DBF4BQ8NFT6 615 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 LNX1Q8TBB1 728 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 KIF12Q96FN5 646 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PPP1R16BQ96T49 567 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PI4K2AQ9BTU6 479 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 CARD6Q9BX69 1037 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 UBN1Q9NPG3 1134 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 DPP3Q9NY33 737 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 PCDHA11Q9Y5I1 949 aa11.46□□□□□ -0.57
TRAPPC4-201ENST00000359005 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TMCO5BA8MYB1 307 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 THAP12O43422 761 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 ERLIN1O75477 346 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 CHRNA1P02708 482 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 CALB1P05937 261 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 CTSHP09668 335 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 MYL6P60660 151 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TMEM62Q0P6H9 643 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 CCDC85BQ15834 202 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 PPP2R5EQ16537 467 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 CLEC16AQ2KHT3 1053 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC10A6Q3KNW5 377 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 WDR72Q3MJ13 1102 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 MEI1Q5TIA1 1274 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TAF3Q5VWG9 929 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TWF2Q6IBS0 349 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 C11orf63Q6NUN7 778 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 FAM117BQ6P1L5 589 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 LRRC52Q8N7C0 313 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TMEM35BQ8NCS4 154 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 TPCN2Q8NHX9 752 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC35G2Q8TBE7 412 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 PHOSPHO2Q8TCD6 241 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 PPM1EQ8WY54 764 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 RUBCNQ92622 972 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 HPDLQ96IR7 371 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 COL25A1Q9BXS0 654 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 MTIF3Q9H2K0 278 aaKnown RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 SLC28A3Q9HAS3 691 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 AVENQ9NQS1 362 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 RNF216Q9NWF9 866 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 STRIP2Q9ULQ0 834 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 NUB1Q9Y5A7 615 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 DUSP10Q9Y6W6 482 aa11.45□□□□□ -0.58
TRAPPC4-201ENST00000359005 PTPRJQ12913 1337 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ENC1O14682 589 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 MTA2O94776 668 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ATP1A1P05023 1023 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ITGB3P05106 788 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 FAM163BP0C2L3 166 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 PNMA6AP0CW24 399 aaPredicted RBP11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 DESP17661 470 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ACO1P21399 889 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ABCB4P21439 1286 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 AMPD2Q01433 879 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 FMO1Q01740 532 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 C1QBPQ07021 282 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 PPP2R2DQ66LE6 453 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 CNKSR3Q6P9H4 555 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 KAT5Q92993 513 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 ZNF653Q96CK0 615 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 PGBD4Q96DM1 585 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 SNX27Q96L92 541 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 RPS6KC1Q96S38 1066 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 OSBPL9Q96SU4 736 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 CISHQ9NSE2 258 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 CNTN3Q9P232 1028 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 PUF60Q9UHX1 559 aaKnown RBP11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 AGAP1Q9UPQ3 857 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 CAPN6Q9Y6Q1 641 aa11.44□□□□□ -0.58
TRAPPC4-201ENST00000359005 SCN5AQ14524 2016 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms