RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TMPRSS15P98073 1019 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 GTF2BQ00403 316 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 PDCD2Q16342 344 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SLC9A9Q8IVB4 645 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 ZNF513Q8N8E2 541 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-201ENST00000358894 GSDMBQ8TAX9 411 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SPIRE2Q8WWL2 714 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CDKL2Q92772 493 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 PCDHB18PQ96TA0 734 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 TRIM55Q9BYV6 548 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 COG5Q9UP83 839 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 PDGFRAP16234 1089 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 PCGF5Q86SE9 256 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 FAM71AQ8IYT1 594 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 UBA3Q8TBC4 463 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 PPP4R1Q8TF05 950 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SEMA4DQ92854 862 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 ERP27Q96DN0 273 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SGSM3Q96HU1 749 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 TMEM121Q9BTD3 319 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SIX2Q9NPC8 291 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 NCANO14594 1321 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 ASTN2O75129 1339 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CCDC195A0A1B0GUA6 201 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 DCTN3O75935 186 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 KRT37O76014 449 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 KITP10721 976 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SCTRP47872 440 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 ROR1Q01973 937 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CNTN2Q02246 1040 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CENPCQ03188 943 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 KLHL38Q2WGJ6 581 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CD302Q8IX05 232 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 EMC1Q8N766 993 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SHC3Q92529 594 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 SERPINB12Q96P63 405 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CYTH2Q99418 400 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 KLC2Q9H0B6 622 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 COL20A1Q9P218 1284 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 CTNNAL1Q9UBT7 734 aa12.9□□□□□ -0.34
COL20A1-201ENST00000358894 TRAPPC3O43617 180 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 TTC4O95801 387 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 ESRRAP11474 423 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 AP3M2P53677 418 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 PIGHQ14442 188 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 RRP1BQ14684 758 aaKnown RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 C3orf62Q6ZUJ4 267 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 KIF12Q96FN5 646 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 KREMEN1Q96MU8 473 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 PWWP2AQ96N64 755 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 UBXN6Q9BZV1 441 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 ZFP69BQ9UJL9 534 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 CFAP69A5D8W1 941 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 DCDC2CA8MYV0 355 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 APRTP07741 180 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 CCNA1P78396 465 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 TMED1Q13445 227 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 ATF7IP2Q5U623 682 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 DUPD1Q68J44 220 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 PRUNE1Q86TP1 453 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 SIAH1Q8IUQ4 282 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 SPDYE1Q8NFV5 336 aaPredicted RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 DHX35Q9H5Z1 703 aaKnown RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 RAB6BQ9NRW1 208 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 WHRNQ9P202 907 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 UBIAD1Q9Y5Z9 338 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 TCRBV7S2A1N4TA0A589 114 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 LPXNO60711 386 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 AP1G2O75843 785 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 SNUPNO95149 360 aaKnown RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 CLCN3P51790 818 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 JAM2P57087 298 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 NIPA1Q7RTP0 329 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 SPATA18Q8TC71 538 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 ZNF606Q8WXB4 792 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 P2RX7Q99572 595 aaKnown RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 SH3GL2Q99962 352 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 NPHS2Q9NP85 383 aa12.89□□□□□ -0.35
COL20A1-201ENST00000358894 METTL5Q9NRN9 209 aaKnown RBP12.89□□□□□ -0.35
COL20A1-201ENST00000358894 ZC3H11AO75152 810 aaKnown RBP eCLIP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 PGK2P07205 417 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 HOXD13P35453 343 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 NAMPTP43490 491 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 RAD23BP54727 409 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 GCNT1Q02742 428 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 MXD4Q14582 209 aaPredicted RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 TTLL4Q14679 1199 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 ANO5Q75V66 913 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 ABRAQ8N0Z2 381 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 FAM71DQ8N9W8 422 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 MBOAT7Q96N66 472 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 LRRC4Q9HBW1 653 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 A1CFQ9NQ94 594 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 FAM49BQ9NUQ9 324 aa12.88□□□□□ -0.35
COL20A1-201ENST00000358894 PPARGC1AQ9UBK2 798 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 NPM3O75607 178 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 MRPS9P82933 396 aaKnown RBP12.88□□□□□ -0.35
COL20A1-201ENST00000358894 DPY19L2Q6NUT2 758 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms