RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 BGNP21810 368 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 IRX1P78414 480 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 CENPCQ03188 943 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 KPNB1Q14974 876 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 CCNG2Q16589 344 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 HADHQ16836 314 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 C1orf146Q5VVC0 180 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 DPY19L2P1Q6NXN4 242 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MCF2L2Q86YR7 1114 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 EMC1Q8N766 993 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SMC1BQ8NDV3 1235 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 FBXO36Q8NEA4 188 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 FEZF2Q8TBJ5 459 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MAGEC3Q8TD91 643 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZDHHC15Q96MV8 337 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 DDX50Q9BQ39 737 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 TARS2Q9BW92 718 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ZCWPW1Q9H0M4 648 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 AAASQ9NRG9 546 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 PARVAQ9NVD7 372 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 DMAC2Q9NW81 257 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ANKRD36CQ5JPF3 1778 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 PIK3CDO00329 1044 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MCF2LO15068 1137 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 AP1G2O75843 785 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 KRT36O76013 467 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM191BP0C7N4 346 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SERPINB4P48594 390 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 RPS6P62753 249 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 SATB1Q01826 763 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 RIPK1Q13546 671 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 ATP6V0A1Q93050 837 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 MKL1Q969V6 931 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 FAF2Q96CS3 445 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 PAFAH2Q99487 392 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 RIT2Q99578 217 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 IP6K2Q9UHH9 426 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 XPO7Q9UIA9 1087 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 GINS2Q9Y248 185 aa6.92□□□□□ -1.3
CSDE1-203ENST00000358528 DDX60Q8IY21 1712 aaKnown RBP6.92□□□□□ -1.3
CSDE1-203ENST00000358528 DPPA5A6NC42 116 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 CCDC22O60826 627 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ATP9AO75110 1047 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 GRAP2O75791 330 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 MYL2P10916 166 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 CYP24A1Q07973 514 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PTK7Q13308 1070 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 KRT81Q14533 505 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SNX30Q5VWJ9 437 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 OTOAQ7RTW8 1153 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TRABD2AQ86V40 505 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SIAH1Q8IUQ4 282 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ARID3BQ8IVW6 561 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RFWD2Q8NHY2 731 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 AGR3Q8TD06 166 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ACAP3Q96P50 834 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 EBF2Q9HAK2 575 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ARHGEF3Q9NR81 526 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 CYP39A1Q9NYL5 469 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 EME2A4GXA9 379 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 DNALI1O14645 258 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TCF4P15884 667 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 GEMIN4P57678 1058 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 OTUD4Q01804 1114 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 MTMR2Q13614 643 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PPP6R3Q5H9R7 873 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SLC27A3Q5K4L6 730 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RFWD3Q6PCD5 774 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 FAM160B2Q86V87 743 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM35BQ8NCS4 154 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ACTL9Q8TC94 416 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 L3MBTL3Q96JM7 780 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TBC1D22BQ9NU19 505 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TXNDC16Q9P2K2 825 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 SLC17A7Q9P2U7 560 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 IQANK1A0A1B0GTG1 560 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 VIL1P09327 827 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NCF2P19878 526 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 ATP4AP20648 1035 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PTPN4P29074 926 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NRLP54845 237 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 EIF3EP60228 445 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 PSMC1P62191 440 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NCOA4Q13772 614 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 BMPR2Q13873 1038 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 BAATQ14032 418 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 GPAT2Q6NUI2 795 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 RCOR2Q8IZ40 523 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 GMCL1P1Q8NEA9 526 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 LMO3Q8TAP4 145 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 HELQQ8TDG4 1101 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NSL1Q96IY1 281 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 MBOAT7Q96N66 472 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 TMEM120AQ9BXJ8 343 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 DENND2DQ9H6A0 471 aaPredicted RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 NGRNQ9NPE2 291 aaKnown RBP6.91□□□□□ -1.3
CSDE1-203ENST00000358528 MROH7Q68CQ1 1323 aa6.91□□□□□ -1.3
CSDE1-203ENST00000358528 DOT1LQ8TEK3 1739 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms