RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 CFAP99D6REC4 459 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TOM1O60784 492 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 NUDT17P0C025 328 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 HNRNPH3P31942 346 aaKnown RBP6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TMTC4Q5T4D3 741 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MFSD5Q6N075 450 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 METTL23Q86XA0 190 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 FAM167BQ9BTA0 163 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM8Q9BZR9 551 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 FBXO28Q9NVF7 368 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 MYRFQ9Y2G1 1151 aa6.86□□□□□ -1.31
VPS13B-202ENST00000357162 JAK1P23458 1154 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DPYSQ14117 519 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FAM45BPQ6NSW5 357 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ACMSDQ8TDX5 336 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 AP1M1Q9BXS5 423 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ABCA4P78363 2273 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 CYP2C8P10632 490 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 GNAT1P11488 350 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 GCLCP48506 637 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TOP3AQ13472 1001 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ARHGEF6Q15052 776 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DGUOKQ16854 277 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 C1orf228Q6PIY5 440 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ANKRD13CQ8N6S4 541 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 BLOC1S5Q8TDH9 187 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 GANQ9H2C0 597 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SLC22A2O15244 555 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 COBLO75128 1261 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 OGNP20774 298 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PHKA2P46019 1235 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PLA2G4AP47712 749 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PDIA2Q13087 525 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ACAP1Q15027 740 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 EFHC2Q5JST6 749 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FAM47EQ6ZV65 393 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 RHPN2Q8IUC4 686 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PRMT1Q99873 361 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 BTBD10Q9BSF8 475 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 MSTO1Q9BUK6 570 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 LRMDAQ9H2I8 198 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 MAP3K20Q9NYL2 800 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 USE1Q9NZ43 259 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 NEU2Q9Y3R4 380 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ATICP31939 592 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PADI6Q6TGC4 694 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 RPF1Q9H9Y2 349 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DNAJA2O60884 412 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SHOX2O60902 331 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SLFN13Q68D06 897 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SDE2Q6IQ49 451 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FAM149B1Q96BN6 582 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DCLK3Q9C098 648 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 MAGEE1Q9HCI5 957 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 COL15A1P39059 1388 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 H3BQF6 201 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SPDYAQ5MJ70 313 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 AAGABQ6PD74 315 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC31Q6UY01 552 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SLC26A11Q86WA9 606 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SFRP1Q8N474 314 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 RAB42Q8N4Z0 105 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FNIP1Q8TF40 1166 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 KLHL8Q9P2G9 620 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PLK4O00444 970 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TRDMT1O14717 391 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 CD3EAPO15446 510 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 EPHB1P54762 984 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 KRT72Q14CN4 511 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TRIM71Q2Q1W2 868 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 EFHC1Q5JVL4 640 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TCHHL1Q5QJ38 904 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 NSMFQ6X4W1 530 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 THNSL1Q8IYQ7 743 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TGFBRAP1Q8WUH2 860 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PLGRKTQ9HBL7 147 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 UBP1Q9NZI7 540 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ECM2O94769 699 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 CCR3P51677 355 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 GFPT1Q06210 699 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 IGSF9BQ9UPX0 1349 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FMO5P49326 533 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 FXR2P51116 673 aaKnown RBP eCLIP6.85□□□□□ -1.317e-6■■■■□ 23.7
VPS13B-202ENST00000357162 PPIDQ08752 370 aaKnown RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 MXD4Q14582 209 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 COG2Q14746 738 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 TATDN2Q93075 761 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 EHD1Q9H4M9 534 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 XPAP23025 273 aaPredicted RBP6.85□□□□□ -1.31
VPS13B-202ENST00000357162 PSMC5P62195 406 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 DUOXA2Q1HG44 320 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 LRRC38Q5VT99 294 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 GRPEL2Q8TAA5 225 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 NEUROG2Q9H2A3 272 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 AMACRQ9UHK6 382 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 ANKRD26Q9UPS8 1709 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 AURKCQ9UQB9 309 aa6.85□□□□□ -1.31
VPS13B-202ENST00000357162 SDR42E2A6NKP2 422 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms