RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 CSE1LP55060 971 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 EFHC1Q5JVL4 640 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 RABGAP1LQ5R372 815 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FAM71DQ8N9W8 422 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 KRT35Q92764 455 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 SRPK1Q96SB4 655 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 PAK5Q9P286 719 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 DMC1Q14565 340 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 PARP9Q8IXQ6 854 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 GOLPH3Q9H4A6 298 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 YY1AP1Q9H869 796 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 RSAD1Q9HA92 442 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TMEM161AQ9NX61 479 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 SELENONQ9NZV5 590 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TBX20Q9UMR3 447 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TAF6LQ9Y6J9 622 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 MSH4O15457 936 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FXR2P51116 673 aaKnown RBP eCLIP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 KLHDC7AQ5VTJ3 777 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 C3orf62Q6ZUJ4 267 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TRAPPC11Q7Z392 1133 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 ADNPQ9H2P0 1102 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 DPP3Q9NY33 737 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 PITPNM2Q9BZ72 1349 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 IQGAP3Q86VI3 1631 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 TFRCP02786 760 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 KCNJ1P48048 391 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 SERPINB9P50453 376 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 E4F1Q66K89 784 aaPredicted RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 IFNEQ86WN2 208 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 JAMLQ86YT9 394 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 CELF4Q9BZC1 486 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 ANKEF1Q9NU02 776 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 CHD1O14646 1710 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 MYO1GB0I1T2 1018 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 RAD51CO43502 376 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 SLC37A4O43826 429 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FDPSP14324 419 aaKnown RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 CCZ1BP86790 482 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 CCZ1P86791 482 aaPredicted RBP13.81□□□□□ -0.2
SCN8A-202ENST00000355133 INPP5AQ14642 412 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 KIF2CQ99661 725 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 RUSC1Q9BVN2 902 aa13.81□□□□□ -0.2
SCN8A-202ENST00000355133 FOXP2O15409 715 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 RALBP11234 206 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 RPS12P25398 132 aaKnown RBP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 ITGA8P53708 1063 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 CYTH1Q15438 398 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 SLITRK1Q96PX8 696 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 YIPF3Q9GZM5 350 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 PNPLA6Q8IY17 1366 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 POLBP06746 335 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 CHRM3P20309 590 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 MDH1P40925 334 aaKnown RBP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 GRIN1Q05586 938 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 LAMB3Q13751 1172 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 TDRD10Q5VZ19 366 aaKnown RBP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 RNF180Q86T96 592 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 DTX3LQ8TDB6 740 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 KCNF1Q9H3M0 494 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 ARL2BPQ9Y2Y0 163 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 ALG6Q9Y672 507 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 TMEM253P0C7T8 217 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 YY1P25490 414 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 SPRP35270 261 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 SREBF2Q12772 1141 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 ZNF513Q8N8E2 541 aaPredicted RBP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 CDH16O75309 829 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 MAGEA4P43358 317 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 FCGRTP55899 365 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 GPRASP2Q96D09 838 aa13.8□□□□□ -0.2
SCN8A-202ENST00000355133 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.8□□□□□ -0.2
SCN8A-202ENST00000355133 H0Y626 953 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 LRG1P02750 347 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 NUMBP49757 651 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 AARS2Q5JTZ9 985 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 C11orf96Q7Z7L8 435 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 MRPL1Q9BYD6 325 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 GPRC5CQ9NQ84 441 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 QRICH2Q9H0J4 1663 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 SPATA31A6Q5VVP1 1343 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 PHF20L1A8MW92 1017 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 RBP3P10745 1247 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 ALDH7A1P49419 539 aaKnown RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 KYNUQ16719 465 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 SDE2Q6IQ49 451 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 TRAF3IP3Q9Y228 551 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 CFAP73A6NFT4 308 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 LRRC36Q1X8D7 754 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 LRRC23Q53EV4 343 aaPredicted RBP13.79□□□□□ -0.2
SCN8A-202ENST00000355133 WDR48Q8TAF3 677 aa13.79□□□□□ -0.2
SCN8A-202ENST00000355133 RANBP17Q9H2T7 1088 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms