RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 MYZAPP0CAP1 466 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 NR1D1P20393 614 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 GTF2A2P52657 109 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 KRT17Q04695 432 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 PWP2Q15269 919 aaKnown RBP16.5■□□□□ 0.23
MBD1-205ENST00000353909 LRIG3Q6UXM1 1119 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 KIAA0319LQ8IZA0 1049 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.5■□□□□ 0.23
MBD1-205ENST00000353909 NFKBIZQ9BYH8 718 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 SCN4AP35499 1836 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 RBM47A0AV96 593 aaKnown RBP16.5■□□□□ 0.23
MBD1-205ENST00000353909 PPFIA4O75335 1185 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 ECEL1O95672 775 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 KRT10P13645 584 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 FNTAP49354 379 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 KLF1Q13351 362 aaPredicted RBP16.5■□□□□ 0.23
MBD1-205ENST00000353909 PPP1R7Q15435 360 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 RHOT1Q8IXI2 618 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 LENG1Q96BZ8 264 aaPredicted RBP16.5■□□□□ 0.23
MBD1-205ENST00000353909 RNF19AQ9NV58 838 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 SCINQ9Y6U3 715 aa16.5■□□□□ 0.23
MBD1-205ENST00000353909 VPS41P49754 854 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 LACTBP83111 547 aaPredicted RBP16.49■□□□□ 0.23
MBD1-205ENST00000353909 PTPN20Q4JDL3 420 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 TMEM35BQ8NCS4 154 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 SCLT1Q96NL6 688 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 MORF4L1Q9UBU8 362 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.49■□□□□ 0.23
MBD1-205ENST00000353909 STRNO43815 780 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 PMS2P54278 862 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 RAD23BP54727 409 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 SKOR1P84550 965 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 MTMR3Q13615 1198 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 GRIK4Q16099 956 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 KIZQ2M2Z5 673 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 ZNF667Q5HYK9 610 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 ILDR2Q71H61 639 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 PLVAPQ9BX97 442 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 DCLK3Q9C098 648 aa16.49■□□□□ 0.23
MBD1-205ENST00000353909 GOLGA8SH3BPF8 625 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 MAGEB2O15479 319 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 TSPAN1O60635 241 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 RPS6KA5O75582 802 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 SLC29A2Q14542 456 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 FAM187BQ17R55 369 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 KAZNQ674X7 775 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 ERICH1Q86X53 443 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 PWWP2AQ96N64 755 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 OSBPL8Q9BZF1 889 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 GOLGA6L10A6NI86 522 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 ZEB2O60315 1214 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 MMP3P08254 477 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 POLR2BP30876 1174 aaKnown RBP16.48■□□□□ 0.23
MBD1-205ENST00000353909 PSMC4P43686 418 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 ACVR2BQ13705 512 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 GRB14Q14449 540 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 KRT71Q3SY84 523 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 DNAJC24Q6P3W2 148 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 DCUN1D2Q6PH85 259 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 KDM7AQ6ZMT4 941 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 CCDC25Q86WR0 208 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 ART4Q93070 314 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 EMID1Q96A84 441 aaPredicted RBP16.48■□□□□ 0.23
MBD1-205ENST00000353909 TINF2Q9BSI4 451 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 BCO2Q9BYV7 579 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 ELOVL4Q9GZR5 314 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 CDHR5Q9HBB8 845 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
MBD1-205ENST00000353909 PASKQ96RG2 1323 aa16.48■□□□□ 0.23
MBD1-205ENST00000353909 PSTPIP1O43586 416 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 IL18RAPO95256 599 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 MCF2P10911 925 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 IVDP26440 423 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 RFC1P35251 1148 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 DUSP28Q4G0W2 176 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 PPP1R15BQ5SWA1 713 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 DPH6Q7L8W6 267 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 ANKRD23Q86SG2 305 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 KATNAL2Q8IYT4 538 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 SLC4A11Q8NBS3 891 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 FAM49AQ9H0Q0 323 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 PABPC3Q9H361 631 aaKnown RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 DNAJC17Q9NVM6 304 aaKnown RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 IP6K2Q9UHH9 426 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 NOVA2Q9UNW9 492 aaKnown RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 CITO14578 2027 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 HMGB1P1B2RPK0 211 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 LSM8O95777 96 aaKnown RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 GCLCP48506 637 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 ZFYVE27Q5T4F4 411 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 MFSD7Q6UXD7 560 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 IFNLR1Q8IU57 520 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 JOSD2Q8TAC2 188 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
MBD1-205ENST00000353909 CCDC114Q96M63 670 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 AAASQ9NRG9 546 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 ASIC3Q9UHC3 531 aa16.47■□□□□ 0.23
MBD1-205ENST00000353909 PCDHGC3Q9UN70 934 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 167.9 ms