RNA–Protein interactions for RNA: ENST00000353468.4

SIGMAR1-202, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 1,582 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-202ENST00000353468 AGPAT1Q99943 283 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 SYT11Q9BT88 431 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 ELOVL4Q9GZR5 314 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 MTIF3Q9H2K0 278 aaKnown RBP21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 HMGXB4Q9UGU5 601 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 NOCTQ9UK39 431 aaKnown RBP21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 ZKSCAN5Q9Y2L8 839 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 SLC4A7Q9Y6M7 1214 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 PTPRSQ13332 1948 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 COL4A6Q14031 1691 aa21.46■■□□□ 1.03
SIGMAR1-202ENST00000353468 M0QZQ0 153 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 AKR1B10O60218 316 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 TADA2AO75478 443 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 NDUFA10O95299 355 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 CALCAP01258 141 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 GNA15P30679 374 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 GNL1P36915 607 aaPredicted RBP21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 KIF11P52732 1056 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 BCAR1P56945 870 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 VPS36Q86VN1 386 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 UNC93AQ86WB7 457 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 TMEM86AQ8N2M4 240 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 SLC20A1Q8WUM9 679 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 TMEM176AQ96HP8 235 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 NT5C1AQ9BXI3 368 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 SNX25Q9H3E2 840 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 ADAMTS1Q9UHI8 967 aa21.45■■□□□ 1.02
SIGMAR1-202ENST00000353468 ARHGEF37A1IGU5 675 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 PAEPP09466 180 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ODC1P11926 461 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 TNFAIP3P21580 790 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ANXA13P27216 316 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZNF677Q86XU0 584 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 SLC4A11Q8NBS3 891 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 PHOSPHO2Q8TCD6 241 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 DDX1Q92499 740 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 SLC9A7Q96T83 725 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZBED2Q9BTP6 218 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ADAM28Q9UKQ2 775 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 NME7Q9Y5B8 376 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 TIMM13Q9Y5L4 95 aaPredicted RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 A8MXQ7 604 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 EIF3CLB5ME19 914 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 NT5C1B-RDH14C9J2C7 533 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 GABRDO14764 452 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 TRAPPC3O43617 180 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ALDH7A1P49419 539 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 HTRA4P83105 476 aaPredicted RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 ORC1Q13415 861 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 BMS1Q14692 1282 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 SPOUT1Q5T280 376 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 TAF3Q5VWG9 929 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 OSTM1Q86WC4 334 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 EIF3CQ99613 913 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 SPTLC3Q9NUV7 552 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 MARCH5Q9NX47 278 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 PUF60Q9UHX1 559 aaKnown RBP21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 DSEQ9UL01 958 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 STXBP5LQ9Y2K9 1186 aa21.44■■□□□ 1.02
SIGMAR1-202ENST00000353468 THAP12O43422 761 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 CYP11A1P05108 521 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 MMEP08473 750 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 CHRNB2P17787 502 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 LMO2P25791 158 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 PBX3P40426 434 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 MAGEA10P43363 369 aaPredicted RBP21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 LHX1P48742 406 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 CDR2Q01850 454 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 SLC18A3Q16572 532 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 TOGARAM2Q6ZUX3 1019 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 METTL23Q86XA0 190 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 GLYCTKQ8IVS8 523 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 LNX1Q8TBB1 728 aaPredicted RBP21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 SPATA18Q8TC71 538 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 ZNF606Q8WXB4 792 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 PCDHB8Q9UN66 801 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 INSL6Q9Y581 213 aa21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 MRPL42Q9Y6G3 142 aaKnown RBP21.43■■□□□ 1.02
SIGMAR1-202ENST00000353468 A0A087X0T9 212 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 DDX3XO00571 662 aaKnown RBP eCLIP21.42■■□□□ 1.024e-10■■■■■ 29.6
SIGMAR1-202ENST00000353468 LCA5LO95447 670 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 PDGFRBP09619 1106 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 FAM228BP0C875 321 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 CD19P15391 556 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 ATP2A2P16615 1042 aaKnown RBP21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 TYMPP19971 482 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 BRD2P25440 801 aaKnown RBP21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 FMO1Q01740 532 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 GFPT1Q06210 699 aaPredicted RBP21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 RASIP1Q5U651 963 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 HERC6Q8IVU3 1022 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 SLC30A5Q8TAD4 765 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 OLIG1Q8TAK6 271 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 HEXIM2Q96MH2 286 aaKnown RBP21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 DESI2Q9BSY9 194 aa21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 SEPT11Q9NVA2 429 aaKnown RBP21.42■■□□□ 1.02
SIGMAR1-202ENST00000353468 HCRTO43612 131 aa21.41■■□□□ 1.02
SIGMAR1-202ENST00000353468 VDRP11473 427 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms