RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SSX2IPQ9Y2D8 614 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 MYH11P35749 1972 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 FOXN3O00409 490 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 AP1G1O43747 822 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 FKBP6O75344 327 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 KRT15P19012 456 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 RRM1P23921 792 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 GRIA2P42262 883 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ARFIP2P53365 341 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ACTR3P61158 418 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 XIAPP98170 497 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 DLGAP5Q15398 846 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CBWD6Q4V339 395 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CBWD3Q5JTY5 395 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CBWD5Q5RIA9 395 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 C6orf163Q5TEZ5 329 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 AAGABQ6PD74 315 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 PDSS2Q86YH6 399 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 TMPRSS6Q8IU80 811 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CLEC10AQ8IUN9 316 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF276Q8N554 614 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 CCDC89Q8N998 374 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF564Q8TBZ8 553 aaPredicted RBP10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 WDR11Q9BZH6 1224 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 EHMT1Q9H9B1 1298 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 LRRC4BQ9NT99 713 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 RHBDL2Q9NX52 303 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 POLLQ9UGP5 575 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 SLC24A2Q9UI40 661 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 DCTN4Q9UJW0 460 aa10.88□□□□□ -0.67
CHRNA1-202ENST00000348749 RBBP6Q7Z6E9 1792 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 IGLV3-22A0A075B6J6 115 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 GSTTP1A0A1W2PQM5 241 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 TMEM221A6NGB7 291 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 STRNO43815 780 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 PSMD10O75832 226 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 SLITRK3O94933 977 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 IL1BP01584 269 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 EEF2P13639 858 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 NMT1P30419 496 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF76P36508 570 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 CD151P48509 253 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 PRELPP51888 382 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 GTF2IP78347 998 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 KCNA1Q09470 495 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 ASPHQ12797 758 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 ARHGAP44Q17R89 818 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 CCDC142Q17RM4 750 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 CFAP157Q5JU67 520 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 SYDE2Q5VT97 1194 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 IZUMO3Q5VZ72 239 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 TMEM179Q6ZVK1 233 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 OTOP1Q7RTM1 612 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 LRRC6Q86X45 466 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 C4orf33Q8N1A6 199 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 OR6Y1Q8NGX8 325 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 SLC5A5Q92911 643 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF653Q96CK0 615 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 RBM15Q96T37 977 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 SLX1AQ9BQ83 275 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 VPS11Q9H270 941 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 EBF3Q9H4W6 596 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 C17orf75Q9HAS0 396 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 ARHGEF4Q9NR80 690 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 KCNQ5Q9NR82 932 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 GTF3C4Q9UKN8 822 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 SIPA1L1O43166 1804 aa10.87□□□□□ -0.67
CHRNA1-202ENST00000348749 KLRG2A4D1S0 409 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 EML1O00423 815 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 TM9SF1O15321 606 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 OPHN1O60890 802 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 CIB2O75838 187 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 TM7SF2O76062 418 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 HARSP12081 509 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 UQCRBP14927 111 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 SERPINB3P29508 390 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 CYP4A11Q02928 519 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 MED21Q13503 144 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 TRIP13Q15645 432 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 EPC2Q52LR7 807 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 CYP4F22Q6NT55 531 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 CDC42EP5Q6NZY7 148 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 B3GNT6Q6ZMB0 384 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 RIPOR1Q6ZS17 1223 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 ZNF554Q86TJ5 538 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 CPNE8Q86YQ8 564 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 SCUBE1Q8IWY4 988 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 SP8Q8IXZ3 490 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 RNF168Q8IYW5 571 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 ZBTB8BQ8NAP8 495 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 TEKT1Q969V4 418 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 HAUS1Q96CS2 278 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 PANX3Q96QZ0 392 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 P2RX7Q99572 595 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 LBHD1Q9BQE6 289 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 NUP85Q9BW27 656 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 TMEM120AQ9BXJ8 343 aa10.86□□□□□ -0.67
CHRNA1-202ENST00000348749 KCNK13Q9HB14 408 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms